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PLM4_65_b1_redo_sep16_scaffold_6321_7

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: 4925..5860

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 Tax=Xanthomonas arboricola RepID=UPI0002FF2792 similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 210.0
  • Bit_score: 100
  • Evalue 1.60e-18
Marine sediment metagenome DNA, contig: S03H2_S01751 {ECO:0000313|EMBL:GAH53522.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 182.0
  • Bit_score: 123
  • Evalue 4.30e-25
DNA-directed RNA polymerase subunit sigma similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 232.0
  • Bit_score: 100
  • Evalue 4.60e-19

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 936
ATGACCGGTAACGCCGGGGACGACGTGGCCGATCTGGTGCGTAAGGCACGCAGTCCGCGCGCTCCGATTCACGAGCAGCAGGCAGCCTTCGCGATCCTCGTCGAGCGGTTCGAGCAGATGGCGATCGCGACCGCGCTCCCGGCGAGCGAGGACCTGGACGCGGCGCGGGATGCCTGTCAGGAAGCCTTCCTGGTGGCCTGGCGCACCCTTCCCAGCTTGCGTGAGCCGGCCGCGTTCGGTGGCTGGCTCAAACGCCTGGTCCGGACCCAGTGCGCCCGGGCCCGACGCCGACGCGGCGCGTCGGCCGAGGTATCGGAGAGCGCGAGCGATCCGGCCGAGGTCCCGGAAAGCGCGAGCGATCCGGCCGAGCTGGTGAGCCGTCACGAGACGCTGCGGTTGATCCTGCGCGCCGTGGGCGAGCTACCGGCGGTGGAGCGTGAGGCGGTCACCCTCTTCTACTTCCTGGGTGAGTCCCTGCGCGTGGTGGCACAGGTGCTGGGCCTGAGCGTCGGCAACGCCGGCAAGCGCGTCTACGAGGCGCGCCTCCGGCTCCGCCGCCGCCTGCCCCGGAGCATCGCCGAGGCCTTTCTGGCCGTGGCGCCGACGCCGGCGTTCGCGCGACGCGTCCAGGCGGGCGTCTTCAATGAGTTCGTGGGCGAATACCGATTCGCGAGCCGACCGGACCACGCGGTGATCATCCGGCGCGAGGGCGACGCGCTGGTGAGCTACGCCGGCGGCCAGCGGAACGTCCTGGCATCCCGCCAGCCGGACAGGTTGACGCCGACGGAGTTCGACGGCGAGGGGCGCTTCCGGCGCGACCGGCGGGGTCGGGTCAGTCACTTCGTCTACTACGAATTCGGCCGTCGCCTCGGAGTGGCGCGAAAGGTGAAGTCGGCACGGACCGCCGCCCCGGTTCGCACCGCCGCCACTCCCTGA
PROTEIN sequence
Length: 312
MTGNAGDDVADLVRKARSPRAPIHEQQAAFAILVERFEQMAIATALPASEDLDAARDACQEAFLVAWRTLPSLREPAAFGGWLKRLVRTQCARARRRRGASAEVSESASDPAEVPESASDPAELVSRHETLRLILRAVGELPAVEREAVTLFYFLGESLRVVAQVLGLSVGNAGKRVYEARLRLRRRLPRSIAEAFLAVAPTPAFARRVQAGVFNEFVGEYRFASRPDHAVIIRREGDALVSYAGGQRNVLASRQPDRLTPTEFDGEGRFRRDRRGRVSHFVYYEFGRRLGVARKVKSARTAAPVRTAATP*