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PLM4_65_b1_redo_sep16_scaffold_6321

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6321_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(2..556)
DNA (555bp) protein (185aa)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Tax=uncultured Chloroflexi bacterium HF0770_09E03 RepID=E0XYN3_9CHLR
Arginase/agmatinase/formiminoglutamase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_6321_2
unknown

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comp(665..1519)
DNA (855bp) protein (285aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6321_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1526..2788)
DNA (1263bp) protein (421aa)
PDZ/DHR/GLGF domain-containing protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTD7_9GAMM bin=16ft_combo_ws3_JS1 species=Rhodanobacter thiooxydans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
PDZ/DHR/GLGF domain protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AHG92360.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_6321_4
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2824..3474
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2G1_ACIC5
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACO32180.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM4_65_b1_redo_sep16_scaffold_6321_5
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3485..4234)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Bacillus oceanisediminis RepID=UPI0002D4E759
Uncharacterized protein {ECO:0000313|EMBL:EFV79174.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6321_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4536..4928
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Paenibacillus mucilaginosus 3016 RepID=H6NAA5_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93813.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_6321_7

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4925..5860
DNA (936bp) protein (312aa)
RNA polymerase sigma70 Tax=Xanthomonas arboricola RepID=UPI0002FF2792
Marine sediment metagenome DNA, contig: S03H2_S01751 {ECO:0000313|EMBL:GAH53522.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA-directed RNA polymerase subunit sigma
PLM4_65_b1_redo_sep16_scaffold_6321_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5931..7571
DNA (1641bp) protein (547aa)
TPR repeat protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0E0G4_THIND
TPR domain containing protein {ECO:0000313|EMBL:KGQ20543.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
TPR repeat protein
PLM4_65_b1_redo_sep16_scaffold_6321_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7564..9072)
DNA (1509bp) protein (503aa)
Putative outer membrane efflux protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU1_GEMAT
putative outer membrane efflux protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAH40668.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_6321_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9072..10460)
DNA (1389bp) protein (463aa)
Hypothetical membrane protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40669.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_6321_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10470..11822)
DNA (1353bp) protein (451aa)
Secretion protein HlyD family protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAH40670.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_6321_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12256..12432
DNA (177bp) protein (59aa)
Esterase/lipase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK77_CHLTF
Esterase
Esterase {ECO:0000313|EMBL:AHG88336.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 12 items

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