ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_31667_1

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: comp(3..1565)

Top 3 Functional Annotations

Value Algorithm Source
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 522.0
  • Bit_score: 595
  • Evalue 3.60e-167
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 531.0
  • Bit_score: 535
  • Evalue 1.20e-149
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 522.0
  • Bit_score: 595
  • Evalue 5.00e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1563
ATGACCGCTCAGCCACAGGTTACCCGGCGCGAGTTTCTCCAGGCCGCTTCGGCGGCCGGCGCGGGCTTGGTGATCGGTTTCACGCTCCCCTCCTGCGCCCGCCCGCCGGCGGGCCCTCCGCTCGAGCCCAACGCCTGGCTGCGGATCGGCCCGGACGAGAGCATCCTGGTGCTGGTGGACCGCTCCGAAATGGGCCAGGGGGTGGCCACGTCGCTCCCGATGCTCCTGGCCGAGGAACTCGAGGCCGACTGGTCGAAAGTTCGCATCGAGTTCGCGCCCGCCGACCCGGCCTACAACAACCTGCTGTTCGGCATGCAGGGAACGGGCGGCAGCAGCAGTATCCGGGCGGCCTACACGGCGCTGCGTCAGGCGGGGGCCGCCGCGCGCGAAGTCCTGATCTCGGCCGCCGCCGAGACCTGGGGTGTCGATCGGTCGGAGTGCCGCGCGGAGCGCGGCGCCGTGATCCACTCGGGCGGCCGGAGTCTCACCTACGGGCGCCTGGTCGCGGCCGCGGCGGTGCTGCCGGTCCCGGCCGACCCGCCCCTCAAGGAATCGAAGGACTGGAAGATCATCGGCACCCGGGTGCCCCGGCTGGACACGCCGCCCAAGGTGGACGGGAGCGCGCAGTTCGGCATCGACGTGACCGTGCCCGGGATGCTGGTCGCCGTGGTGGCGCGCTGTCCCGTGTTCGGCGGCAAGGTGGCAAGTTTCGACCCGGCCGGGGCGCAGGCCGTGCCGGGGGTGCGTCACGTGGTGCAGATCTCGAGCGGCGTCGCGGTGGTGGCCGACGGCTACTGGCCGGCCCTCACCGGTCGCGCGGCCCTGGAGGTCGCGTGGGACGAGGGGCCCAACGCCGGCGTCTCGAGCGCCGGCATTTCGCGTCTGTTGGCCGACCGCGCGGAGCGGCCCGGCGTGCGCGCCCGGCACGAGGGCAACCCGGACGCCGCCCTGTCGCTGGCGGCGCGCCGGCTCGACGCCGAATACGAAACACCGTTCCTGGCCCACGCCACCATGGAGCCGATGAACTGCACCGCGCACGTGCGGCCGGACGGGGTGGACATCTGGGCGCCCACCCAGTTCCAGACCGGCGCGCACCAGATGGGCGCCGGCATCGGCGGCGTGGCACCCGAGCAGGTGAAGGTGCACACCACGTACCTGGGAGGCGGGTTCGGCCGCCGGTTCGAGCTGGACTTCATCCAGGAGGCCCTCGAGACGTCCAAGGCCGTGGGGGCACCGGTCAAGGTCATCTGGTCGCGCGAGGACGACGTCCGGAACGAGTGGTATCGGCCGGCGTCCTATCATCGCCTCCGGGCTGGGCTCGACGGGCGGGGCCGGCCGGTGGCCTGGACCCATCGGGTGGTAGCGCCCTCGATCATGATCCGCGTCTTCCCCAGCACGGTGCAGAACGGGCTCGACGGCGAGGCGGTGGAGGGCGCCGTCGAGATGCCGTACGCGGTGGCGAACGCCCACGTGGACTACGCGATGGCCGACACCGGCGTGCCGGTGGGCTTCTGGCGGTCGGTCAACCACTCGTACAACGCCTTCGTGGTCGAGAGCTTCATC
PROTEIN sequence
Length: 521
MTAQPQVTRREFLQAASAAGAGLVIGFTLPSCARPPAGPPLEPNAWLRIGPDESILVLVDRSEMGQGVATSLPMLLAEELEADWSKVRIEFAPADPAYNNLLFGMQGTGGSSSIRAAYTALRQAGAAAREVLISAAAETWGVDRSECRAERGAVIHSGGRSLTYGRLVAAAAVLPVPADPPLKESKDWKIIGTRVPRLDTPPKVDGSAQFGIDVTVPGMLVAVVARCPVFGGKVASFDPAGAQAVPGVRHVVQISSGVAVVADGYWPALTGRAALEVAWDEGPNAGVSSAGISRLLADRAERPGVRARHEGNPDAALSLAARRLDAEYETPFLAHATMEPMNCTAHVRPDGVDIWAPTQFQTGAHQMGAGIGGVAPEQVKVHTTYLGGGFGRRFELDFIQEALETSKAVGAPVKVIWSREDDVRNEWYRPASYHRLRAGLDGRGRPVAWTHRVVAPSIMIRVFPSTVQNGLDGEAVEGAVEMPYAVANAHVDYAMADTGVPVGFWRSVNHSYNAFVVESFI