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PLM4_65_b1_redo_sep16_scaffold_31667

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_31667_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..1565)
DNA (1563bp) protein (521aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_31667_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(1567..2022)
DNA (456bp) protein (152aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=Singulisphaera acidiphila RepID=L0DLL1_SINAD
(2Fe-2S)-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_31667_3
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2084..2293)
DNA (210bp) protein (70aa)
Outer membrane protein, OMP85 family Tax=Cyclobacterium qasimii M12-11B RepID=S7WPW0_9BACT
hypothetical protein
Outer membrane protein, OMP85 family {ECO:0000313|EMBL:EPR66163.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
PLM4_65_b1_redo_sep16_scaffold_31667_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2522..3517
DNA (996bp) protein (332aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_31667_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3525..4109)
DNA (585bp) protein (195aa)
RNA polymerase sigma 70 Tax=Sorangium cellulosum So0157-2 RepID=S4XQU8_SORCE
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EYF03307.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
RNA polymerase sigma 70
PLM4_65_b1_redo_sep16_scaffold_31667_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4393..5010
DNA (618bp) protein (206aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 bin=GWF2_Ignavibacteria_35_20 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
HAD family hydrolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_31667_7
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4968..5174)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Gillisia limnaea DSM 15749 RepID=H2BUI1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ03859.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_31667_8
unknown

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comp(5171..5260)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 8 items

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