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PLM4_32_b1_sep16_scaffold_1041

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1041_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3..1820
DNA (1818bp) protein (606aa)
Bacterial surface antigen (D15) family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
outer membrane protein assembly complex, YaeT protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1041_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1867..2433
DNA (567bp) protein (189aa)
Outer membrane chaperone Skp (OmpH) family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R8_GEMAT
outer membrane chaperone Skp (OmpH) family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1041_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2436..3476
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1041_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3469..4740
DNA (1272bp) protein (424aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
PLM4_32_b1_sep16_scaffold_1041_5
unknown

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comp(5392..6252)
DNA (861bp) protein (287aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1041_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6312..7430
DNA (1119bp) protein (373aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1041_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7427..8083
DNA (657bp) protein (219aa)
Uncharacterized protein conserved in bacteria Tax=Bacteria RepID=E7C459_9BACT
protein of unknown function DUF374
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1041_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8053..9093
DNA (1041bp) protein (347aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1041_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9132..10454
DNA (1323bp) protein (441aa)
Glutamate dehydrogenase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLI2_CHLTF
Glu/Leu/Phe/Val dehydrogenase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1041_10

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10508..10957
DNA (450bp) protein (150aa)
Methyltransferase {ECO:0000313|EMBL:EQD61208.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD61208.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Methyltransferase Tax=mine drainage metagenome RepID=T1AXY6_9ZZZZ
hypothetical protein
PLM4_32_b1_sep16_scaffold_1041_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10968..12497
DNA (1530bp) protein (510aa)
UPF0747 protein Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E8_9BACT
protein of unknown function UCP012535
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1041_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12507..12785
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1041_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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12812..14350
DNA (1539bp) protein (513aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YHS9_9DELT
integral membrane protein MviN
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1041_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14347..16170
DNA (1824bp) protein (608aa)
UvrABC system protein C Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
UvrABC system protein C
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1041_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16173..17336
DNA (1164bp) protein (388aa)
Putative threonine synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1041_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17649..18524
DNA (876bp) protein (292aa)
UPF0272 protein NIDE0534 Tax=Candidatus Nitrospira defluvii RepID=D8PAQ0_9BACT
UPF0272 protein
UPF0272 protein J421_3233 {ECO:0000256|HAMAP-Rule:MF_01074}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1041_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18521..19972
DNA (1452bp) protein (484aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 17 items

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