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PLM4_32_b1_sep16_scaffold_1051

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1051_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1051_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(401..664)
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1051_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1334..1792
DNA (459bp) protein (153aa)
Blue-copper protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue-copper protein
Blue-copper protein {ECO:0000313|EMBL:BAH37183.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_1051_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1858..2175)
DNA (318bp) protein (106aa)
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1051_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2172..3140)
DNA (969bp) protein (323aa)
NAD-dependent epimerase/dehydratase bin=GWA2_Ignavibacteriae_55_25 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1051_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3137..4264)
DNA (1128bp) protein (376aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036686F2
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1051_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4273..5478)
DNA (1206bp) protein (402aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036CAF16
aminotransferase class I and II
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1051_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5657..7969
DNA (2313bp) protein (771aa)
Putative protease bin=GWC2_CP_Nitrospirae-rel_42_7 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative protease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1051_9
unknown

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7966..8370
DNA (405bp) protein (135aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1051_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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8458..8916
DNA (459bp) protein (153aa)
(2Fe-2S)-binding protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILY8_KORVE
(2Fe-2S)-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_32_b1_sep16_scaffold_1051_11
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8913..11057
DNA (2145bp) protein (715aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_32_b1_sep16_scaffold_1051_12
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11054..11425
DNA (372bp) protein (124aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=Thiorhodovibrio sp. 970 RepID=H8Z6X7_9GAMM
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:EIC19762.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
Displaying 12 items

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