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PLM4_32_b1_sep16_scaffold_1842

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1842_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
Putative GDP-6-deoxy-D-lyxo-4-hexulose reductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I6_GEMAT
putative GDP-6-deoxy-D-lyxo-4-hexulose reductase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(423..1388)
DNA (966bp) protein (322aa)
GDP-mannose 4,6-dehydratase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I037_CALAS
gmd; GDP-mannose 4,6-dehydratase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


1572..1763
DNA (192bp) protein (64aa)
50S ribosomal protein L28 bin=GWC2_Ignavibacteria_56_12 species=uncultured Chloroflexi bacterium HF0770_09E03 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
50S ribosomal protein L28
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1842_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(1844..2200)
DNA (357bp) protein (119aa)
50S ribosomal protein L17 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL17_GEMAT
50S ribosomal protein L17
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2200..2469)
DNA (270bp) protein (90aa)
DNA-directed RNA polymerase subunit alpha Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
DNA-directed RNA polymerase subunit alpha
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2466..3047)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase subunit alpha Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
DNA-directed RNA polymerase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1842_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(3066..3707)
DNA (642bp) protein (214aa)
30S ribosomal protein S4 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J1_GEMAT
rpsD; 30S ribosomal protein S4
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(3711..4142)
DNA (432bp) protein (144aa)
30S ribosomal protein S11 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J2_GEMAT
Ribosomal protein S11
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(4146..4526)
DNA (381bp) protein (127aa)
30S ribosomal protein S13 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS13_GEMAT
Ribosomal protein S13
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5092..6222)
DNA (1131bp) protein (377aa)
Response regulator receiver modulated metal dependent phosphohydrolase Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IAC6_9BACL
response regulator receiver modulated metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_1842_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6520..7206)
DNA (687bp) protein (229aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase Tax=Thiobacillus denitrificans RepID=UPI0003696F87
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7199..8071)
DNA (873bp) protein (291aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1)
Dihydroorotate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J6_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8068..9297)
DNA (1230bp) protein (410aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J7_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9294..9776)
DNA (483bp) protein (161aa)
SsrA-binding protein Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6Y141_BACIE
SsrA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_trna_1
unknown

Not on your lists

9870..9953
DNA (84bp)
transferRNA Leu
PLM4_32_b1_sep16_scaffold_1842_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(10048..10422)
DNA (375bp) protein (125aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
moeB2; molybdopterin biosynthesis protein MoeB
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_1842_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10419..11111)
DNA (693bp) protein (231aa)
UBA/THIF-type NAD/FAD binding protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J681_ANAD2
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACL66976.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM4_32_b1_sep16_scaffold_1842_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11136..11591)
DNA (456bp) protein (152aa)
Rrf2 family DNA-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K0_GEMAT
Rrf2 family DNA-binding protein
Rrf2 family DNA-binding protein {ECO:0000313|EMBL:BAH39025.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_1842_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11657..12724
DNA (1068bp) protein (356aa)
Putative outer membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAV4_GEMAT
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG88756.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1842_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12731..14149)
DNA (1419bp) protein (473aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K1_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1842_20
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14211..14555
DNA (345bp) protein (115aa)
cupin 2 barrel domain-containing protein
cupin domain-containing protein bin=bin3_NC10 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=BJP_IG2069_Anaerolineales_43_63
PLM4_32_b1_sep16_scaffold_1842_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14569..15171)
DNA (603bp) protein (201aa)
Beta-lactamase domain protein Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RKH4_DEIPM
beta-lactamase domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15192..16127)
DNA (936bp) protein (312aa)
Thioredoxin reductase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2B9_PELTS
TrxB; thioredoxin reductase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16141..16899)
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_1842_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16896..17717)
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K7_GEMAT
PHP domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17744..18010)
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A956_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18014..18319)
DNA (306bp) protein (102aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_32_b1_sep16_scaffold_1842_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18325..19740)
DNA (1416bp) protein (472aa)
Dihydrolipoamide acyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A958_GEMAT
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1842_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19762..20742)
DNA (981bp) protein (327aa)
Branched-chain alpha-keto acid dehydrogenase E1 component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH09_CHLTF
Transketolase central region
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1842_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20735..21784)
DNA (1050bp) protein (350aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 32 in total

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