ggKbase home page

PLM4_32_b1_sep16_scaffold_2662

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2662_1
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1003
DNA (1002bp) protein (334aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SG7_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KFE63942.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
permease
PLM4_32_b1_sep16_scaffold_2662_2
unknown

Not on your lists

comp(1124..1708)
DNA (585bp) protein (195aa)
id=24544174 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM4_32_b1_sep16_scaffold_2662_3
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1836..2885
DNA (1050bp) protein (350aa)
Glycoside hydrolase family 18 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y743_9SPHI
glycoside hydrolase family protein
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_32_b1_sep16_scaffold_2662_4
unknown

Not on your lists

2849..3136
DNA (288bp) protein (96aa)
hypothetical protein Tax=Paenibacillus massiliensis RepID=UPI000364B245
PLM4_32_b1_sep16_scaffold_2662_5
Exiguobacterium sp. RIT341, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3158..3457
DNA (300bp) protein (100aa)
hypothetical protein Tax=Kushneria aurantia RepID=UPI00037BB034
Homocysteine methyltransferase {ECO:0000313|EMBL:EZP58922.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. RIT341.;"
homocysteine methyltransferase
PLM4_32_b1_sep16_scaffold_2662_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3670..5907)
DNA (2238bp) protein (746aa)
Putative membrane associated hydrolase Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CN67_ROBBH
membrane associated hydrolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_2662_7
unknown

Not on your lists

comp(6040..6420)
DNA (381bp) protein (127aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2662_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7133..8356
DNA (1224bp) protein (408aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y07_SOLUE
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_32_b1_sep16_scaffold_2662_9
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8366..9304)
DNA (939bp) protein (313aa)
B-glycosidase, glycoside hydrolase family 16 protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WF8_CYTH3
b-glucosidase
B-glycosidase, glycoside hydrolase family 16 protein {ECO:0000313|EMBL:ABG58258.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
PLM4_32_b1_sep16_scaffold_2662_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9367..9642)
DNA (276bp) protein (92aa)
Hydrolase, alpha/beta hydrolase fold having protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QIS1_9DELT
Hydrolase, alpha/beta hydrolase fold having protein {ECO:0000313|EMBL:EPX61149.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
alpha/beta fold family hydrolase
Displaying 10 items

View Taxonomy