ggKbase home page

PLM4_32_b1_sep16_scaffold_2870

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2870_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1423
DNA (1422bp) protein (474aa)
Putative FAD linked oxidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
FAD linked oxidase domain protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_2870_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1423..2217
DNA (795bp) protein (265aa)
thymidylate synthase Tax=Thiobacillus thioparus RepID=UPI00036C829B
thymidylate synthase
Tax=CG_Hydro_01
PLM4_32_b1_sep16_scaffold_2870_3
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..2705
DNA (492bp) protein (164aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
dihydrofolate reductase Tax=Spirosoma panaciterrae RepID=UPI000363691C
Tax=RBG_16_Gamma2_64_11_curated
PLM4_32_b1_sep16_scaffold_2870_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2737..3831)
DNA (1095bp) protein (365aa)
Putative AP superfamily protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQI9_SINAD
AP superfamily protein
Putative AP superfamily protein {ECO:0000313|EMBL:AGA31180.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_32_b1_sep16_scaffold_2870_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4006..5133
DNA (1128bp) protein (376aa)
D-alanine-D-alanine ligase-like protein bin=GWC2_Deltaproteobacteria_42_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
D-alanine--D-alanine ligase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_2870_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5130..6137
DNA (1008bp) protein (336aa)
D-alanine-D-alanine ligase-like protein bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
D-alanine--D-alanine ligase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_2870_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6134..6700
DNA (567bp) protein (189aa)
GCN5-related N-acetyltransferase bin=GWF2_Planctomycetes_50_10 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
acetyltransferase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_2870_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6697..7818
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Marinimicrobia RepID=UPI0003821674
kamA; Lysine 2,3-aminomutase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_2870_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7866..9380)
DNA (1515bp) protein (505aa)
Putative ABC transporter substrate binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A765_GEMAT
putative ABC transporter substrate binding protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_2870_10
unknown

Not on your lists

9565..10113
DNA (549bp) protein (183aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2870_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10117..11745
DNA (1629bp) protein (543aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
metal dependent phosphohydrolase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_2870_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11857..12405
DNA (549bp) protein (183aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EST15343.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EST15343.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
3-oxoacyl-[acyl-carrier protein] reductase Tax=Pseudomonas putida S610 RepID=V6J6H6_PSEPU
short-chain alcohol dehydrogenase
PLM4_32_b1_sep16_scaffold_2870_13
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12402..12635
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IED3_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM03621.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
PLM4_32_b1_sep16_scaffold_2870_14
unknown

Not on your lists

12632..12760
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 14 items

View Taxonomy