ggKbase home page

PLM4_32_b1_sep16_scaffold_2872

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2872_1
unknown

Not on your lists

41..301
DNA (261bp) protein (87aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2872_2
unknown

Not on your lists

298..810
DNA (513bp) protein (171aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2872_3
unknown

Not on your lists

807..941
DNA (135bp) protein (45aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2872_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

938..2308
DNA (1371bp) protein (457aa)
Putative NtrC family two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
putative NtrC family two-component response regulator
Putative NtrC family two-component response regulator {ECO:0000313|EMBL:BAH38208.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_2872_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2338..2769
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_2872_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2801..4291
DNA (1491bp) protein (497aa)
Aldehyde dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2872_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4354..5229
DNA (876bp) protein (292aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_2872_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5232..5735
DNA (504bp) protein (168aa)
UPF0234 protein yajQ
hypothetical protein; K09767 hypothetical protein bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_2872_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5728..6966
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
SpoIID/LytB domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_2872_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6983..7639
DNA (657bp) protein (219aa)
Putative oxidoreductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
oxidoreductase domain protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_2872_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7600..7944
DNA (345bp) protein (115aa)
Putative oxidoreductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
putative oxidoreductase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_2872_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7941..9161
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000364533F
protein of unknown function DUF4105
Uncharacterized protein {ECO:0000313|EMBL:AHG90468.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2872_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9139..9834)
DNA (696bp) protein (232aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
Curli production assembly/transport component CsgG
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 13 items

View Taxonomy