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PLM4_32_b1_sep16_scaffold_10109

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_10109_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..418)
DNA (417bp) protein (139aa)
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89757.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_10109_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(470..3052)
DNA (2583bp) protein (861aa)
Putative outer membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E4_GEMAT
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89756.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_10109_3
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3518..3943)
DNA (426bp) protein (142aa)
Putative sterol carrier protein Tax=Thermus oshimai JL-2 RepID=K7QVI2_THEOS
putative sterol carrier protein
Putative sterol carrier protein {ECO:0000313|EMBL:AFV76566.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
PLM4_32_b1_sep16_scaffold_10109_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4032..4166)
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_10109_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(4163..4657)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
protein of unknown function DUF4098
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_b1_sep16_scaffold_10109_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4810..6483
DNA (1674bp) protein (558aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Urocanate hydratase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ21_RHOM4
urocanate hydratase
PLM4_32_b1_sep16_scaffold_10109_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6495..7733
DNA (1239bp) protein (413aa)
Imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Imidazolonepropionase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK71_RHOMR
PLM4_32_b1_sep16_scaffold_10109_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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comp(7808..9340)
DNA (1533bp) protein (511aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase bin=GWA2_Bacteroidetes_33_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
PLM4_32_b1_sep16_scaffold_10109_9
unknown

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9394..9561
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 9 items

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