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PLM4_32_b1_sep16_scaffold_379

Search features with annotation key words

Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_379_31
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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26323..26586
DNA (264bp) protein (88aa)
Ferredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein {ECO:0000313|EMBL:AHG89643.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_32
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26794..27990)
DNA (1197bp) protein (399aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24)
Putative 3-oxoadipate enol-lactonase Tax=Candidatus Nitrospira defluvii RepID=D8PJ01_9BACT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_33
unknown

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comp(27950..28534)
DNA (585bp) protein (195aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_379_34
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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28644..29210
DNA (567bp) protein (189aa)
Putative ribonuclease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
3'-5' exonuclease {ECO:0000313|EMBL:AHG89646.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_35
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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29380..29916
DNA (537bp) protein (179aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_36
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29927..30496
DNA (570bp) protein (190aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_37
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

30514..32286
DNA (1773bp) protein (591aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88955.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_38
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32283..33569
DNA (1287bp) protein (429aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88956.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_39
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(33596..33925)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
protein of unknown function DUF59
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_40
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(33957..35087)
DNA (1131bp) protein (377aa)
Beta-lactamase family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC30_GEMAT
beta-lactamase family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_41
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(35084..35863)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_42
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

36022..38349
DNA (2328bp) protein (776aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_43
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(38353..41274)
DNA (2922bp) protein (974aa)
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_44
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(41320..42687)
DNA (1368bp) protein (456aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_45
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

42824..43729
DNA (906bp) protein (302aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_46
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

43726..44274
DNA (549bp) protein (183aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_47
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(44289..45149)
DNA (861bp) protein (287aa)
AraC family transcriptional regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
Helix-turn-helix, AraC domain-containing protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_48
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

45313..48468
DNA (3156bp) protein (1052aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAH40792.1}; EC=2.7.11.1 {ECO:0000313|EMBL:BAH40792.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative serine/threonine protein kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE65_GEMAT
PLM4_32_b1_sep16_scaffold_379_49
Propionibacterium sp. HGH0353, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48567..49544)
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Propionibacterium sp. HGH0353 RepID=S3WS21_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH01504.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_379_50
unknown

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49902..50627
DNA (726bp) protein (242aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_379_51
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

50779..51552
DNA (774bp) protein (258aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase bin=GWB2_Elusimicrobia_63_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_52
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(51549..52661)
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_379_53
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(52883..54268)
DNA (1386bp) protein (462aa)
Chromosomal replication initiator protein DnaA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_54
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


54409..54570
DNA (162bp) protein (54aa)
Ribosomal protein L34 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEQ0_GEMAT
50S ribosomal protein L34
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_55
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

55168..56892
DNA (1725bp) protein (575aa)
Membrane protein insertase YidC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
Membrane protein oxaA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_56
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

56915..58279
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_57
unknown

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comp(58291..58488)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_379_58
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(58570..59514)
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP5_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_59
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(59557..60411)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEK9_GEMAT
Peptidase S54, rhomboid domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_60

Not on your lists

comp(60408..61241)
DNA (834bp) protein (278aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EWT7_9NOCA
D-alanine--D-alanine ligase
Displaying items 31-60 of 67 in total

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