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PLM4_32_b1_sep16_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_379_1
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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3..1355
DNA (1353bp) protein (451aa)
metallophosphoesterase (EC:3.1.3.5)
Metallophosphoesterase {ECO:0000313|EMBL:ABA23601.1}; EC=3.1.3.5 {ECO:0000313|EMBL:ABA23601.1};; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
Metallophosphoesterase Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5Y5_ANAVT
PLM4_32_b1_sep16_scaffold_379_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1352..2044
DNA (693bp) protein (231aa)
Abortive infection protein Tax=Rhodanobacter sp. 115 RepID=I4W8D3_9GAMM
Abortive infection protein {ECO:0000313|EMBL:EIL95724.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
membrane protein of unknown function
PLM4_32_b1_sep16_scaffold_379_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2122..3033)
DNA (912bp) protein (304aa)
Putative ABC transporter permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I7_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG88716.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3030..4082)
DNA (1053bp) protein (351aa)
Putative ABC transporter permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3I8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG88715.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4086..5498)
DNA (1413bp) protein (471aa)
ABC transporter related Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WF22_KINRD
ABC transporter related protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_379_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5531..6310)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017453E4
NGG1p interacting factor 3 protein, NIF3
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_379_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6328..7293)
DNA (966bp) protein (322aa)
Putative lipoprotein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J1_GEMAT
basic membrane lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_379_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7338..7793)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GLJ8_CALEA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_379_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7793..8605)
DNA (813bp) protein (271aa)
peptidase M23 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A3AFAA
peptidase M23B
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8602..9501)
DNA (900bp) protein (300aa)
Chromosome partitioning protein ParB Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB-like partition protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_379_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9498..10340)
DNA (843bp) protein (281aa)
ParA family protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CVJ3_MYXXD
Cobyrinic acid ac-diamide synthase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10699..12492)
DNA (1794bp) protein (598aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12699..13334
DNA (636bp) protein (212aa)
peroxidase (EC:1.11.1.7)
peroxidase Tax=Marinobacterium rhizophilum RepID=UPI00036E04BA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13392..14705)
DNA (1314bp) protein (438aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000344BF53
hypothetical membrane protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_379_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14698..15654)
DNA (957bp) protein (319aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034BDA7F
ABC transporter related protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_16
unknown

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comp(15724..15927)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_379_17
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15920..16126)
DNA (207bp) protein (69aa)
Transcriptional regulator, XRE family Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QLC9_BRESC
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADK99984.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
PLM4_32_b1_sep16_scaffold_379_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16123..16521)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Pseudomonas stutzeri NF13 RepID=M2UIA5_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EMD98209.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri NF13.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_379_19
unknown

Not on your lists

comp(16587..16880)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_379_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16881..17324)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EFJ2_THECK
protein of unknown function DUF1094
Uncharacterized protein {ECO:0000313|EMBL:AHG89607.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(17334..17762)
DNA (429bp) protein (143aa)
Putative iron-sulfur cluster assembly protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC45_GEMAT
SUF system FeS assembly protein, NifU family
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM4_32_b1_sep16_scaffold_379_22
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17759..18619)
DNA (861bp) protein (287aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
Cysteine desulfurase Tax=Thauera phenylacetica B4P RepID=N6ZNT7_9RHOO
SufS subfamily cysteine desulfurase
PLM4_32_b1_sep16_scaffold_379_23
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18623..19021)
DNA (399bp) protein (133aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Cysteine desulfurase / L-selenocysteine selenide-lyase (L-alanine-forming) Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IP93_ANADE
SufS subfamily cysteine desulfurase
PLM4_32_b1_sep16_scaffold_379_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19032..19985)
DNA (954bp) protein (318aa)
FeS assembly protein SufD Tax=Pedosphaera parvula Ellin514 RepID=B9XEV6_9BACT
FeS assembly protein SufD {ECO:0000313|EMBL:EEF61820.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sufD; FeS assembly protein SufD
PLM4_32_b1_sep16_scaffold_379_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20029..20289)
DNA (261bp) protein (87aa)
Iron-regulated ABC transporter permease protein SufD Tax=Chthonomonas calidirosea T49 RepID=S0EXB8_9BACT
Iron-regulated ABC transporter permease protein SufD
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_379_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20286..21047)
DNA (762bp) protein (254aa)
Putative iron-sulfur cluster assembly ATPase SufC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC43_GEMAT
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AHG89626.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21053..22486)
DNA (1434bp) protein (478aa)
Putative iron-sulfur cluster assembly protein SufB Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC42_GEMAT
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AHG89627.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_379_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22831..23403
DNA (573bp) protein (191aa)
Peptide deformylase bin=GWC2_Ignavibacteria_56_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptide deformylase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_379_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23415..24092
DNA (678bp) protein (226aa)
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:CDM66530.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CDM66530.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme bin=GWF2_Methylomirabilis_70_14 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM4_32_b1_sep16_scaffold_379_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(24145..26205)
DNA (2061bp) protein (687aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3R1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37138.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying items 1-30 of 67 in total

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