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PLM4_32_b1_sep16_scaffold_406

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_406_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_406_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(122..637)
DNA (516bp) protein (172aa)
Hypothetical membrane protein bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein of unknown function DUF3341
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_406_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(637..1986)
DNA (1350bp) protein (450aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A0_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_406_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1983..4970)
DNA (2988bp) protein (996aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative oxidoreductase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_406_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4978..5580)
DNA (603bp) protein (201aa)
Menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA bin=GWA2_Deltaproteo_65_63 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_406_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5782..6621)
DNA (840bp) protein (280aa)
Putative methyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_406_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6618..8054)
DNA (1437bp) protein (479aa)
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AHG91280.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
pilus retraction protein PilT; K02669 twitching motility protein PilT bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
PLM4_32_b1_sep16_scaffold_406_8
unknown

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comp(8062..8541)
DNA (480bp) protein (160aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_406_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8591..9478)
DNA (888bp) protein (296aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:BAH39744.1}; EC=1.1.1.31 {ECO:0000313|EMBL:BAH39744.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
3-hydroxyisobutyrate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE6_GEMAT
PLM4_32_b1_sep16_scaffold_406_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9604..10398
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2D5Y6_9BACT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG89613.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_406_11
S_OP1_64_32, KB1, Bacteria

Not on your lists

10395..11462
DNA (1068bp) protein (356aa)
Molybdate ABC transporter, ATPase subunit Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQR9_ACEAZ
molybdate ABC transporter ATPase
Tax=S_OP1_64_32
PLM4_32_b1_sep16_scaffold_406_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11455..12642)
DNA (1188bp) protein (396aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_406_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

12863..13534
DNA (672bp) protein (224aa)
Transcriptional regulator, TetR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U156_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH82546.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TetR family transcriptional regulator
PLM4_32_b1_sep16_scaffold_406_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13537..15411
DNA (1875bp) protein (625aa)
Acyl-CoA dehydrogenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_406_15
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

15513..15902
DNA (390bp) protein (130aa)
Putative 7-cyano-7-deazaguanine reductase Tax=delta proteobacterium NaphS2 RepID=D8F934_9DELT
7-cyano-7-deazaguanine reductase
Tax=BJP_IG2069_Spirochaetales_48_31
PLM4_32_b1_sep16_scaffold_406_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16010..17293
DNA (1284bp) protein (428aa)
gltA; citrate synthase (EC:2.3.3.1) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I (EC:2.3.3.1)
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_406_17
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17347..18456
DNA (1110bp) protein (370aa)
Acetylornithine deacetylase {ECO:0000313|EMBL:CDS55383.1}; EC=3.5.1.16 {ECO:0000313|EMBL:CDS55383.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
ArgE Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QII1_DESAH
argE; protein ArgE
PLM4_32_b1_sep16_scaffold_406_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(18453..19364)
DNA (912bp) protein (304aa)
Cysteine synthase bin=GWA2_Methylomirabilis_73_35 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine synthase
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 18 items

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