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PLM4_32_b1_sep16_scaffold_984

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_984_1
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..210
DNA (210bp) protein (70aa)
PAS/PAC sensor hybrid histidine kinase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LM37_HALO1
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY15215.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_32_b1_sep16_scaffold_984_2
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(202..1299)
DNA (1098bp) protein (366aa)
Agmatine deiminase (EC:3.5.3.12)
Porphyromonas-type peptidyl-arginine deiminase Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YS53_9CHLB
Porphyromonas-type peptidyl-arginine deiminase {ECO:0000313|EMBL:EAT59136.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
PLM4_32_b1_sep16_scaffold_984_3
RLO_PLX_64_10, Bacteria

Not on your lists

comp(1303..2256)
DNA (954bp) protein (318aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4Z8_CHLAD
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_984_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4100..4951)
DNA (852bp) protein (284aa)
4-alpha-glucanotransferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B79C31
4-alpha-Glucanotransferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_984_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4948..6933)
DNA (1986bp) protein (662aa)
Glycosyl hydrolase, family 57 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L234_THERP
Protein of unknown function DUF3536
Uncharacterized protein {ECO:0000313|EMBL:AHG87964.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_984_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6971..7510)
DNA (540bp) protein (180aa)
putative alpha-amylase (EC:3.2.1.1) bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_984_7
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7609..8703
DNA (1095bp) protein (365aa)
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
PLM4_32_b1_sep16_scaffold_984_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8664..10226)
DNA (1563bp) protein (521aa)
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glycogen synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A847_GEMAT
PLM4_32_b1_sep16_scaffold_984_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10174..10326)
DNA (153bp) protein (51aa)
phosphorylase (EC:2.4.1.1)
Phosphorylase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A848_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_984_10
unknown

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11177..11698
DNA (522bp) protein (174aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_984_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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11711..12244
DNA (534bp) protein (178aa)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_32_b1_sep16_scaffold_984_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(12241..13920)
DNA (1680bp) protein (560aa)
ABC transporter related protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXN9_HALO1
ABC transporter
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_984_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14071..15309
DNA (1239bp) protein (413aa)
L-sorbosone dehydrogenase Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F9_NITHN
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AHG90403.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_984_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15338..15571
DNA (234bp) protein (78aa)
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_984_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15581..15919
DNA (339bp) protein (113aa)
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_984_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15995..17272)
DNA (1278bp) protein (426aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:BAH38410.1}; EC=4.2.3.1 {ECO:0000313|EMBL:BAH38410.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Threonine synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A850_GEMAT
PLM4_32_b1_sep16_scaffold_984_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17269..18189)
DNA (921bp) protein (307aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Homoserine kinase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF12_RHOMR
homoserine kinase
PLM4_32_b1_sep16_scaffold_984_18
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18244..19353
DNA (1110bp) protein (370aa)
Alanine dehydrogenase/PNT-like protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDX0_ANADE
alanine dehydrogenase
Alanine dehydrogenase/PNT-like protein {ECO:0000313|EMBL:ABC82775.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM4_32_b1_sep16_scaffold_984_19
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19373..19669
DNA (297bp) protein (99aa)
NAD(P)(+) transhydrogenase; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] bin=bin3_NC10 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
pntA; nicotinamide nucleotide transhydrogenase subunit alpha2 (EC:1.6.1.2)
Tax=RBG_16_Deltaproteobacteria_42_7_curated
PLM4_32_b1_sep16_scaffold_984_20
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19666..21075
DNA (1410bp) protein (470aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
NAD(P) transhydrogenase subunit beta Tax=Anaeromyxobacter sp. (strain K) RepID=B4UL46_ANASK
PLM4_32_b1_sep16_scaffold_984_21
unknown

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comp(21122..21226)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_984_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21289..22245
DNA (957bp) protein (319aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG90161.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 22 items

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