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PLM4_32_b1_sep16_scaffold_6157

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_6157_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..1019
DNA (1017bp) protein (339aa)
WD40 domain protein beta Propeller Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF
WD40-like beta Propeller containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_6157_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1107..1808
DNA (702bp) protein (234aa)
Signal peptidase I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_6157_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2010..2435
DNA (426bp) protein (142aa)
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_6157_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2435..3187
DNA (753bp) protein (251aa)
hypothetical protein Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_6157_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3722..4306
DNA (585bp) protein (195aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_6157_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4383..4802
DNA (420bp) protein (140aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_6157_7
unknown

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comp(4844..5335)
DNA (492bp) protein (164aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_6157_8
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5425..5625)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding protein family bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cold-shock DNA-binding domain-containing protein
Tax=GWB2_Desulfobacterales_56_26_curated
PLM4_32_b1_sep16_scaffold_6157_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5679..6389
DNA (711bp) protein (237aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_6157_10
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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7229..7636
DNA (408bp) protein (136aa)
Response regulator receiver Tax=delta proteobacterium MLMS-1 RepID=Q1NWA6_9DELT
Fis family transcriptional regulator
Tax=RBG_16_Zixibacteria_40_9_curated
PLM4_32_b1_sep16_scaffold_6157_11
unknown

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7623..8189
DNA (567bp) protein (189aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_6157_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8692..9261
DNA (570bp) protein (190aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_6157_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9258..10274
DNA (1017bp) protein (339aa)
Protease HtpX homolog bin=GWC2_Ignavibacteria_56_12 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Zn-dependent protease with chaperone function
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_6157_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10207..11229)
DNA (1023bp) protein (341aa)
Response regulator receiver sensor signal transduction histidine kinase bin=GWD2_RBX1-related_39_127 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
sensor protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_6157_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11273..12373)
DNA (1101bp) protein (367aa)
Two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 15 items

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