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PLM4_32_b1_sep16_scaffold_3309

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3309_1
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1242)
DNA (1242bp) protein (414aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FUP1_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE68212.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_3309_2
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1246..1455)
DNA (210bp) protein (70aa)
Putative outer membrane protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TB0_STIAD
TonB-dependent receptor
Putative outer membrane protein {ECO:0000313|EMBL:EAU63723.1}; TonB-dependent receptor {ECO:0000313|EMBL:ADO75923.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_32_b1_sep16_scaffold_3309_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1401..4214)
DNA (2814bp) protein (938aa)
TonB-dependent receptor Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SCK9_9DELT
TonB-dependent receptor {ECO:0000313|EMBL:ERK86135.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
TonB-dependent receptor
PLM4_32_b1_sep16_scaffold_3309_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4397..6553)
DNA (2157bp) protein (719aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035EFF67
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3309_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6563..7924)
DNA (1362bp) protein (454aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89289.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3309_6
unknown

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8068..8295
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3309_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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comp(8309..9349)
DNA (1041bp) protein (347aa)
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_32_b1_sep16_scaffold_3309_8
unknown

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comp(9353..9880)
DNA (528bp) protein (176aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3309_9
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9877..11418)
DNA (1542bp) protein (514aa)
FAD/FMN-dependent dehydrogenase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLJ3_SOLCM
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AFD08880.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM4_32_b1_sep16_scaffold_3309_10
unknown

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comp(11415..11798)
DNA (384bp) protein (128aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3309_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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11916..12818
DNA (903bp) protein (301aa)
hypothetical protein; K06911 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative pirin-like protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_3309_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(12879..13385)
DNA (507bp) protein (169aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87419.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_b1_sep16_scaffold_3309_13
uncultured Acidobacteria bacterium A12, Acidobacteria, Bacteria

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comp(13929..15338)
DNA (1410bp) protein (470aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium A12 RepID=F8TTL9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26530.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A12.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_3309_14
unknown

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comp(15514..15819)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3309_15
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15819..16784)
DNA (966bp) protein (322aa)
Putative glutathione synthase Tax=Streptomyces davawensis JCM 4913 RepID=K4QU75_9ACTO
putative glutathione synthase
Putative glutathione synthase {ECO:0000313|EMBL:CCK24473.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM4_32_b1_sep16_scaffold_3309_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16781..17635)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKI5_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78747.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM4_32_b1_sep16_scaffold_3309_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17656..18678)
DNA (1023bp) protein (341aa)
ina; M6 family metalloprotease domain-containing protein (EC:3.4.24.-)
M6 family metalloprotease domain-containing protein {ECO:0000313|EMBL:CCH02240.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCH02240.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
M6 family metalloprotease domain-containing protein Tax=Fibrella aestuarina BUZ 2 RepID=I0KDN7_9BACT
Displaying 17 items

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