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PLM4_32_b1_sep16_scaffold_3732

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3732_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1..2298)
DNA (2298bp) protein (766aa)
protein kinase Tax=Rhodococcus opacus RepID=UPI00029CAEF8
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3732_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2300..2689)
DNA (390bp) protein (130aa)
TM2 domain containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQ24_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_3732_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2854..3873
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI00036EF7CB
Oxidoreductase, putative {ECO:0000313|EMBL:CCH56065.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
oxidoreductase
PLM4_32_b1_sep16_scaffold_3732_4
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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comp(3880..4050)
DNA (171bp) protein (57aa)
mlo:mlr4653 aromatic-L-amino-acid decarboxylase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Aromatic-L-amino-acid decarboxylase
Tax=RBG_13_Spirochaetes_68_11_curated
PLM4_32_b1_sep16_scaffold_3732_5
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(4044..5249)
DNA (1206bp) protein (402aa)
mlo:mlr4653 aromatic-L-amino-acid decarboxylase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
aromatic-L-amino-acid decarboxylase
Tax=GWB2_Chloroflexi_54_36_curated
PLM4_32_b1_sep16_scaffold_3732_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5331..6887
DNA (1557bp) protein (519aa)
Peptidase M20 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023W7_SOLUE
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG89293.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3732_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6889..7425)
DNA (537bp) protein (179aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_32_b1_sep16_scaffold_3732_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7559..8257)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034D8CF2
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA28020.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM4_32_b1_sep16_scaffold_3732_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8422..8964
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3732_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8961..9623
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3732_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9635..11119
DNA (1485bp) protein (495aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3732_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11134..11937
DNA (804bp) protein (268aa)
PBS lyase HEAT domain protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PBS lyase HEAT domain-containing protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PLM4_32_b1_sep16_scaffold_3732_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12015..13601
DNA (1587bp) protein (529aa)
Carboxyl-terminal processing protease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q3_GEMAT
carboxyl-terminal protease
Carboxyl-terminal protease {ECO:0000313|EMBL:AHG88001.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3732_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(13608..15431)
DNA (1824bp) protein (608aa)
Putative protease with the C-terminal PDZ domain Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ47_CHLTF
putative protease with the C-terminal PDZ domain
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_32_b1_sep16_scaffold_3732_15
unknown

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15477..15737
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 15 items

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