ggKbase home page

PLM0_60_b1_sep16_scaffold_229

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_229_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..2103)
DNA (2103bp) protein (701aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Polyphosphate kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB08_GEMAT
Polyphosphate kinase
PLM0_60_b1_sep16_scaffold_229_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2263..2598
DNA (336bp) protein (112aa)
CutA1 divalent ion tolerance protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQ27_ANADE
CutA1 divalent ion tolerance protein
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:AHG90282.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2648..3466
DNA (819bp) protein (273aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_229_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3463..4218
DNA (756bp) protein (252aa)
Putative ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH37868.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_229_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4211..5962
DNA (1752bp) protein (584aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K7_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_229_6
unknown

Not on your lists

6022..6426
DNA (405bp) protein (135aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_229_7

Not on your lists

comp(6440..7048)
DNA (609bp) protein (203aa)
ATP-dependent Clp protease ATP-binding subunit ClpC (Fragment) Tax=uncultured bacterium W5-51b RepID=H9BX56_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:AFD03378.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium W5-51b.;"
ATPase AAA-2 domain protein
PLM0_60_b1_sep16_scaffold_229_8
unknown

Not on your lists

comp(7104..7949)
DNA (846bp) protein (282aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_229_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8059..10032
DNA (1974bp) protein (658aa)
Glucose-methanol-choline oxidoreductase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF66_9CHLR
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EFH90466.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_229_10
unknown

Not on your lists

comp(10145..10432)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_229_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10469..11656)
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37168.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_229_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11710..12045)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K4_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_229_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12080..12676)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K3_GEMAT
cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHG90280.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12678..14720)
DNA (2043bp) protein (681aa)
Cytochrome c-type biogenesis protein CcmF Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K2_GEMAT
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:AHG90279.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14717..15163)
DNA (447bp) protein (149aa)
Cytochrome c-type biogenesis protein CcmE Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
CcmE/CycJ protein
CcmE/CycJ protein {ECO:0000313|EMBL:AHG90278.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_16
unknown

Not on your lists

15306..15677
DNA (372bp) protein (124aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_229_17
Serratia symbiotica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15718..16047)
DNA (330bp) protein (110aa)
hypothetical protein Tax=Vitreoscilla stercoraria RepID=UPI00037A5E7D
Uncharacterized protein {ECO:0000313|EMBL:CDS58764.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia symbiotica.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_229_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16044..17639)
DNA (1596bp) protein (532aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|SAAS:SAAS00029376};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glycerol kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K0_GEMAT
PLM0_60_b1_sep16_scaffold_229_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17636..18652)
DNA (1017bp) protein (339aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9DBI5_9BURK
DNA topoisomerase I catalytic core domain protein
DNA topoisomerase I catalytic core domain protein {ECO:0000313|EMBL:AHG90270.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18746..19525
DNA (780bp) protein (260aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAH37858.1}; EC=4.2.1.17 {ECO:0000313|EMBL:BAH37858.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Enoyl-CoA hydratase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J8_GEMAT
PLM0_60_b1_sep16_scaffold_229_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19522..20667
DNA (1146bp) protein (382aa)
DNA replication and repair protein RecF Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J7_GEMAT
DNA replication and repair protein recF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_22
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20989..21525
DNA (537bp) protein (179aa)
OsmC family protein Tax=mine drainage metagenome RepID=T1BWM0_9ZZZZ
OsmC family protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM0_60_b1_sep16_scaffold_229_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21576..22367
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEL2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27697.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM0_60_b1_sep16_scaffold_229_24
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22398..23147
DNA (750bp) protein (250aa)
Integral membrane protein TerC Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKK7_ANASK
integral membrane protein TerC
Uncharacterized protein {ECO:0000313|EMBL:GAO01594.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
PLM0_60_b1_sep16_scaffold_229_25
unknown

Not on your lists

23144..24127
DNA (984bp) protein (328aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_229_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24124..24447
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J6_GEMAT
protein of unknown function DUF721
Uncharacterized protein {ECO:0000313|EMBL:AHG90266.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_229_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24598..25851
DNA (1254bp) protein (418aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA gyrase subunit B Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT
DNA gyrase B subunit
Displaying 27 items

View Taxonomy