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PLM0_60_b1_sep16_scaffold_367

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_367_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..372)
DNA (372bp) protein (124aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT
PLM0_60_b1_sep16_scaffold_367_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(369..1514)
DNA (1146bp) protein (382aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT
Succinyl-CoA ligase [ADP-forming] subunit beta
PLM0_60_b1_sep16_scaffold_367_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1568..2515)
DNA (948bp) protein (316aa)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000380661D
carbamate kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM0_60_b1_sep16_scaffold_367_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2512..4248)
DNA (1737bp) protein (579aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X9_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38689.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_367_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4250..5617)
DNA (1368bp) protein (456aa)
manB; phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:BAH38690.1}; EC=5.4.2.8 {ECO:0000313|EMBL:BAH38690.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Phosphomannomutase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y0_GEMAT
PLM0_60_b1_sep16_scaffold_367_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5623..7209)
DNA (1587bp) protein (529aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase subunit N Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=NUON_GEMAT
NAD(P)H-quinone oxidoreductase subunit 2
PLM0_60_b1_sep16_scaffold_367_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7209..8786)
DNA (1578bp) protein (526aa)
proton-translocating NADH-quinone oxidoreductase, chain M
Proton-translocating NADH-quinone oxidoreductase, chain M bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM0_60_b1_sep16_scaffold_367_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8795..11014)
DNA (2220bp) protein (740aa)
NADH-quinone oxidoreductase chain L Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT
proton-translocating NADH-quinone oxidoreductase, chain L
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_367_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(11014..11307)
DNA (294bp) protein (98aa)
NADH-quinone oxidoreductase subunit K 2 Tax=Geobacter uraniireducens (strain Rf4) RepID=NUOK2_GEOUR
NAD(P)H-quinone oxidoreductase subunit 4L
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_367_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11297..11851)
DNA (555bp) protein (185aa)
NADH-quinone oxidoreductase chain J Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y5_GEMAT
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_367_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11848..12348)
DNA (501bp) protein (167aa)
NADH-quinone oxidoreductase subunit I Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_367_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12348..13565)
DNA (1218bp) protein (406aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase subunit H Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
PLM0_60_b1_sep16_scaffold_367_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13631..15217)
DNA (1587bp) protein (529aa)
Putative NADH-quinone oxidoreductase chain G Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein {ECO:0000313|EMBL:AHG90826.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_367_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15217..16530)
DNA (1314bp) protein (438aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F {ECO:0000313|EMBL:BAH38699.1}; EC=1.6.99.5 {ECO:0000313|EMBL:BAH38699.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
NADH-quinone oxidoreductase chain F Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
PLM0_60_b1_sep16_scaffold_367_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16531..17079)
DNA (549bp) protein (183aa)
NADH-quinone oxidoreductase chain E Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:AHG90828.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_367_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17076..18383)
DNA (1308bp) protein (436aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase subunit D Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
PLM0_60_b1_sep16_scaffold_367_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18384..19079)
DNA (696bp) protein (232aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase subunit C Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
NAD(P)H-quinone oxidoreductase subunit J
PLM0_60_b1_sep16_scaffold_367_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19076..19702)
DNA (627bp) protein (209aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
NADH-quinone oxidoreductase subunit B Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
PLM0_60_b1_sep16_scaffold_367_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19693..20097)
DNA (405bp) protein (135aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase subunit A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z4_GEMAT
NAD(P)H-quinone oxidoreductase subunit 3
PLM0_60_b1_sep16_scaffold_367_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20295..20849
DNA (555bp) protein (185aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000255|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000255|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000255|HAMAP-Rule:MF_00146};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Deoxycytidine triphosphate deaminase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DCD_GEMAT
PLM0_60_b1_sep16_scaffold_367_21
unknown

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20910..21203
DNA (294bp) protein (98aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_367_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21207..21593)
DNA (387bp) protein (129aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Malate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
Displaying 22 items

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