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PLM0_60_b1_sep16_scaffold_458

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_458_1
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4..942)
DNA (939bp) protein (313aa)
Two-component response regulator Tax=Microcystis aeruginosa PCC 9806 RepID=I4GUH6_MICAE
diguanylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM0_60_b1_sep16_scaffold_458_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1171..2334)
DNA (1164bp) protein (388aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
PLM0_60_b1_sep16_scaffold_458_3
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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comp(2520..3455)
DNA (936bp) protein (312aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036405AE
ompR; response regulator receiver, transcriptional regulatory protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM0_60_b1_sep16_scaffold_458_4
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3455..4588)
DNA (1134bp) protein (378aa)
NAD-dependent epimerase/dehydratase Tax=Geobacter sp. (strain M18) RepID=E8WQJ7_GEOS8
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADW12900.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM0_60_b1_sep16_scaffold_458_5
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4894..5889
DNA (996bp) protein (332aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000360D400
nodB; chitooligosaccharide deacetylase
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:AFP31152.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
PLM0_60_b1_sep16_scaffold_458_6
bacterium UASB14, Bacteria

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5889..6911
DNA (1023bp) protein (341aa)
FemAB-related protein, PEP-CTERM system-associated Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2X2_GEODF
Uncharacterized protein {ECO:0000313|EMBL:GAK51276.1}; species="Bacteria.;" source="bacterium UASB14.;"
FemAB-like protein
PLM0_60_b1_sep16_scaffold_458_7
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6908..8080
DNA (1173bp) protein (391aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPR8_DESBD
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ACU90297.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
PLM0_60_b1_sep16_scaffold_458_8
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8077..8682
DNA (606bp) protein (202aa)
Protein tyrosine phosphatase Tax=Burkholderia sp. (strain 383) RepID=Q39M73_BURS3
low molecular weight phosphotyrosine phosphatase family protein
Protein tyrosine phosphatase {ECO:0000313|EMBL:KEZ02586.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
PLM0_60_b1_sep16_scaffold_458_9
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(8710..10263)
DNA (1554bp) protein (518aa)
Putative Acyl-CoA ligase (AMP-forming),exosortase system associated Tax=Nitrolancetus hollandicus Lb RepID=I4EMI8_9CHLR
Putative Acyl-CoA ligase (AMP-forming),exosortase system associated {ECO:0000313|EMBL:CCF85901.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
fadD; AMP-dependent synthetase and ligase
PLM0_60_b1_sep16_scaffold_458_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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10538..11536
DNA (999bp) protein (333aa)
nadE; NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIQ6_ANASK
Tax=RBG_16_Zixibacteria_53_22_curated
PLM0_60_b1_sep16_scaffold_458_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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11536..13506
DNA (1971bp) protein (657aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ADB53724.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ADB53724.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Asparagine synthetase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFD1_CONWI
PLM0_60_b1_sep16_scaffold_458_12
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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13530..13802
DNA (273bp) protein (91aa)
Putative uncharacterized protein bin=GWA2_OP3_52_12 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18563.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_458_13

Not on your lists

13827..15296
DNA (1470bp) protein (490aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA12860.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM0_60_b1_sep16_scaffold_458_14
unknown

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15337..16209
DNA (873bp) protein (291aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_458_15
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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16206..17393
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GVA8_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73454.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM0_60_b1_sep16_scaffold_458_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17390..18547
DNA (1158bp) protein (386aa)
Glycosyl transferase group 1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y063_LEPCP
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AHG90026.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_458_17
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(18783..19673)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Kordia algicida OT-1 RepID=A9DY18_9FLAO
group 1 glycosyl transferase
Tax=GWC2_Nitrospirae_57_9_curated
PLM0_60_b1_sep16_scaffold_458_18
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20169..21239)
DNA (1071bp) protein (357aa)
hypothetical protein Tax=Paracoccus sp. TRP RepID=UPI000225FA94
Uncharacterized protein {ECO:0000313|EMBL:KIC41617.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_458_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

21474..22355
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EEB5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83027.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_458_20
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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23112..24302
DNA (1191bp) protein (397aa)
Glycosyl transferase family 2 bin=GWB2_Desulfobacterales_56_26 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
glycosyl transferase group 2 family protein
Tax=GWB2_Desulfobacterales_56_26_curated
PLM0_60_b1_sep16_scaffold_458_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24373..26358
DNA (1986bp) protein (662aa)
Asparagine synthetase Tax=Microcoleus sp. PCC 7113 RepID=K9WM99_9CYAN
asparagine synthase
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:AFZ20904.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM0_60_b1_sep16_scaffold_458_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26361..27914
DNA (1554bp) protein (518aa)
Putative polysaccharide biosynthesis protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V2_GEMAT
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG90016.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_458_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27932..29002)
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNX9_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV15408.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
PLM0_60_b1_sep16_scaffold_458_24
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

29325..30353
DNA (1029bp) protein (343aa)
Tax=GWC2_Nitrospirae_57_9_curated
PLM0_60_b1_sep16_scaffold_458_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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30350..31576
DNA (1227bp) protein (409aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CB76_DESTA
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM0_60_b1_sep16_scaffold_458_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31578..32846)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47U78_COLP3
Uncharacterized protein {ECO:0000313|EMBL:EWY41277.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_458_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32846..33163)
DNA (318bp) protein (106aa)
UDP-N-acetylglucosamine 2-epimerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W6_GEMAT
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AHG90019.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_458_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(33180..33734)
DNA (555bp) protein (185aa)
UDP-N-acetylglucosamine 2-epimerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W6_GEMAT
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AHG90019.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_458_29
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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34193..35347
DNA (1155bp) protein (385aa)
Glycosyl transferase group 1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAK3_AMMDK
group 1 glycosyl transferase
Tax=CG_Delta_03
PLM0_60_b1_sep16_scaffold_458_30
unknown

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comp(35440..35724)
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying 30 items

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