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PLM0_60_b1_sep16_scaffold_863

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_863_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..384
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
Polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:AHG91721.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_863_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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424..1647
DNA (1224bp) protein (408aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
PLM0_60_b1_sep16_scaffold_863_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1693..2397
DNA (705bp) protein (235aa)
MIP family channel protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:AHG91723.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_863_4
unknown

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comp(2415..2801)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_863_5
unknown

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comp(2842..3249)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_863_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3348..3731)
DNA (384bp) protein (128aa)
sulfurtransferase Tax=Gemmata obscuriglobus RepID=UPI00016C3DA6
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CDM67101.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Rhodanese-like protein
PLM0_60_b1_sep16_scaffold_863_7
unknown

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comp(3728..4018)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_863_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4183..4656)
DNA (474bp) protein (158aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Peptide methionine sulfoxide reductase MsrA Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE97_SINAD
methionine-S-sulfoxide reductase
PLM0_60_b1_sep16_scaffold_863_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4653..5198)
DNA (546bp) protein (182aa)
hydrolase Tax=Hymenobacter norwichensis RepID=UPI0003B751B2
DinB superfamily {ECO:0000313|EMBL:CDM66153.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_863_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5217..5933)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEI7_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI66058.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM0_60_b1_sep16_scaffold_863_11
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5960..6547)
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IYH5_NOSP7
Uncharacterized protein {ECO:0000313|EMBL:KJH70397.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_863_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6590..7132)
DNA (543bp) protein (181aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Inorganic pyrophosphatase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA36_GEMAT
Inorganic pyrophosphatase
PLM0_60_b1_sep16_scaffold_863_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7129..8163)
DNA (1035bp) protein (345aa)
Aldo/keto reductase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY12_RUBXD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABG03716.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM0_60_b1_sep16_scaffold_863_14
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8237..9208)
DNA (972bp) protein (324aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM0_60_b1_sep16_scaffold_863_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9211..10188)
DNA (978bp) protein (326aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Porphobilinogen deaminase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA38_GEMAT
PLM0_60_b1_sep16_scaffold_863_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10178..11692)
DNA (1515bp) protein (505aa)
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABG04924.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABG04924.1};; EC=4.2.1.75 {ECO:0000313|EMBL:ABG04924.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
PLM0_60_b1_sep16_scaffold_863_17

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comp(11689..12885)
DNA (1197bp) protein (399aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6Q4U4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH75182.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator, AsnC family
PLM0_60_b1_sep16_scaffold_863_18
unknown

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comp(12888..13046)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_863_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12991..13662)
DNA (672bp) protein (224aa)
Heme exporter protein CcmC Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:AHG91727.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_863_20
unknown

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comp(13786..13905)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 20 items

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