ggKbase home page

PLM0_60_b1_sep16_scaffold_679_17

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(14073..17231)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 925.0
  • Bit_score: 1128
  • Evalue 0.0
Error-prone DNA polymerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 1096.0
  • Bit_score: 747
  • Evalue 1.10e-212
DNA polymerase III, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 925.0
  • Bit_score: 1128
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3159
ATGGGATTCGTCGAGCTCAGAGCCCGTTCCGCCTTCTCCTTCGGCGACGGCAGCGCTTCACCGGAAGCACTCGTCGCTCACGCGGCATCACTCGGCTACGGTGCCATCGGGATCACCGACACCGCGGATCTGGGCGGGATCGTTCGCTTCGGGCTCGAAGCGCGCCGGCAGGGTGTGACACCGATTGTCGGCGCCGAGCTCAACATCGATGGATGTCCCGCCGCTTTTCTGGCGCGGTCGAGAGAGGGATTCAACAACCTCGCGTCCCTCGTCACACGATCGCGAGTGGGAGAGCTCTCGACCTGGAAGAAGGGGGACGGAAAAAAATCGCGCGGACGCCCGCGCATCTCCTGGCAACAGATAGCGGAGCGGAGTGAAGGACTGCAGGTGTTGACCGGTCCGGCGTCCGGGCCGGTCGCATCCAGTCTCCGCGCCGGCGATTTCAGGGGAGCGGAGCGCACGATCTGCCGGTGGCGCGACGTCTTCGCCGACAGGCTCGCGGTCGAGGTACAGCTGCATCACACGAGCGGCAACGAGGCGGCGCTCGCCGCCGCCCTGATCGAGCTCGCGGAGCGGCACAAAGTGCCATGGGTCATCTGTCACGAGCCTCGCTACATCGACAACGACAGCCGGCTCGTGCACGACGTACTCACTGCTCTCCGCTACGACACCACTATCGACGATGCACTTGCCCGAGGTCTGCTGCATCCGAATGGCGAATGGCGTCTCAATTCCCCGGAGGAGATGGCCGAGCGGTGGAAGGGACGCGAAGCGGGCCTGGAGGAGAGCGAGCGAATCGCATCCGAGTGCGACTTCAGTCTCACGTGGGTGAGACCGCCGCTCCCGCAGTTTCCGGTTCCCGAGGGATTCACCGACGACTCCTTTCTGCGCGAGAAAGTCTTCGCGGGCGCGCGCGAGCGGTGGGGAGAGATCGGCAGCAAGGAGACCGCGCAGCTCGAGCACGAGCTGAGAGTCATCGGGAATCTGGGCTTCGCCGGATTCTTTCTCGTGATGTGGGACGCGGTGGATTTCGCTCGCAAGAAGGGAATCCTTTGCCAGGGACGCGGCAGCGCCGCCAACTCCGCGGTCGCGTATTGTCTCGCCATCACGGCGGTGGATCCTGTGCGGCATGGACTGCTGTTCGAGCGATTTCTCTCCGAGATCCGTGTCGACGGACAGACAGAAGCTCCCGACATCGATGTCGACATCGAGCACGATCGGCGCGAGGAGGTGCTCGACTACGTCTATGACAAGTACAATCGGGCAAAGGCGGCGATCACCTGCATCGTGCAGATGTACCGTGGGCCGAACGCGATTCTCGATTCGATGCGCGCGTTCGGGTATCCGGTCGAGATGGCGACGAATCTCTCCAAGAGAATTCACTGGAGTGATCCAGCCGAAGGAGCGAAGTACATCGAGGAAACTCTCGCTCCCAAGTTCGGTCTCGATCTCGACAACCCACGAGGGAAGGCGACTCTCGCTGCGATGGCGGCGTTCGAGGGAGTGCCTCGTCTTCGCTCCACGCACGTCGGTGGATTCGTTCTCTCCTCCGCACCACTCGGAGACTACTTGCCGGTCGAACACACGACCATGGGTCGCACGATCATACAGTTCGACAAGGATGATCTCGATGCCGTCGGAGTTCCGAAGTTCGATTTCCTCGGCCTCGGCGCACTGTCACTGGTGAGACGCGCGTTCGACATGATCGAGGTGCGCACCGGAACGAGGCCGGAGATGTACAAGCTCCCGCCTGACGATGAAGAGACGTACAACCTGATCGCGCACGGCGAGACGATCGGAACATTCCAGATCGAGAGCCGCGCGCAGATCGCATCGGTGCTGCATACGAAGCCGGACAGGCTTTACGACATCGTGGTGCAGGTGGCGCTCATACGTCCCGGTCCGATCCAGGCGAATTTCGTGCATCCATACACCAGGCGGCGGCGCGGACTGGAGCCGGTGACCTACGCGCATCCCGATCTCGAGCCTATTCTCAAACGCACACAAGGAATCCCCATCTTTCAGGAACAGGCGATGGCGATCGCCATGAAGCTCGGAGGCTATTCGGCGGCGCAGGCCGACGAGCTGAGGCGCACGATGGGGCACATTCGGAAGGTCGAGCGCCTGGTGCGCGTACTCGAGCAGCTGCGCGCGCGCATGGTCGAGCGGGGAGTCGATGAAGCCGTCGCGGCGCAGATCGCGGAGGATCTGAAAAGCTTCGCCAACTACGGATTTCCGGAGTCGCACGCGTGGAGCTTCGCCCTCATCGCGTACGCTACGGGTTATCTCAAGGCGCACTATCCGGCGGAATTCTACGCGGGTCTGCTGAACTCCTGGCCGATGGGCTTCTATCCGCCGTCCACGCTCATTCACGATGCGAGACGGCACGGGCTGAAAGTTCTGCCGCCGTGCATGCGCGATGGAGATTGGGAATGCACCACCGCGCCAACCGACAATCCGGAGAGGCCGGCGCTTCGCATTGGCTGGCGTCACATTCGCGGTCTGGGCGAGAAATCGCTCGAAGCTCTGAAAACCGCGAGAAGCTGGGATCGGTTTGCATCGATCGACGATGTAGTGCAGCGGACGAAGCTACAGCGCGCCGATGCGCTGCAGCTCGCGCGCGCGGGAGCTTTCGGATGCTGGGAACCGGATCGTCGCCGTGCGGCGTGGGTCGCGATGCGAGCGGTGGGAGACAGCTTGCCCCTCGCTCCCGCGCGACAGACATCGTACAACCCGAGAGCTCTCACGCGTGACGAGCTGATCTTCCTGGATTATTTCTCGGTCGGCATCAGCGTCAGCGGCCACCCAATGGAGCATTTGCGGGAGAAACTCCGCGCGGCGGGCGCGCTCGACTCGAGGGAGCTGGAGCAGCTCGAGGGCGGCGAGTCCATCGTCACGGCGGGACTCGTCACCATTCGCCAGCAGCCGCAGAGCGCCAAGGGCACGGTATTCCTGCTCATGGAAGACGAGTTCGGATTCATCAACGTGATCGTCTCCAAGAGGATGGTCGAGAAGTATTGCGAGGTCGTGAAGTTCTCGACGTTCGTGGTGGTGCAGGGAAAGTTCGAGCGCGATGGCGGGGTGAGAAATGTCATCGGCAAGCGATTCAGCGAGCTCAAGGTGAAGGAGCTCGTCCACGCCAGTCGCGACTTCCACTAG
PROTEIN sequence
Length: 1053
MGFVELRARSAFSFGDGSASPEALVAHAASLGYGAIGITDTADLGGIVRFGLEARRQGVTPIVGAELNIDGCPAAFLARSREGFNNLASLVTRSRVGELSTWKKGDGKKSRGRPRISWQQIAERSEGLQVLTGPASGPVASSLRAGDFRGAERTICRWRDVFADRLAVEVQLHHTSGNEAALAAALIELAERHKVPWVICHEPRYIDNDSRLVHDVLTALRYDTTIDDALARGLLHPNGEWRLNSPEEMAERWKGREAGLEESERIASECDFSLTWVRPPLPQFPVPEGFTDDSFLREKVFAGARERWGEIGSKETAQLEHELRVIGNLGFAGFFLVMWDAVDFARKKGILCQGRGSAANSAVAYCLAITAVDPVRHGLLFERFLSEIRVDGQTEAPDIDVDIEHDRREEVLDYVYDKYNRAKAAITCIVQMYRGPNAILDSMRAFGYPVEMATNLSKRIHWSDPAEGAKYIEETLAPKFGLDLDNPRGKATLAAMAAFEGVPRLRSTHVGGFVLSSAPLGDYLPVEHTTMGRTIIQFDKDDLDAVGVPKFDFLGLGALSLVRRAFDMIEVRTGTRPEMYKLPPDDEETYNLIAHGETIGTFQIESRAQIASVLHTKPDRLYDIVVQVALIRPGPIQANFVHPYTRRRRGLEPVTYAHPDLEPILKRTQGIPIFQEQAMAIAMKLGGYSAAQADELRRTMGHIRKVERLVRVLEQLRARMVERGVDEAVAAQIAEDLKSFANYGFPESHAWSFALIAYATGYLKAHYPAEFYAGLLNSWPMGFYPPSTLIHDARRHGLKVLPPCMRDGDWECTTAPTDNPERPALRIGWRHIRGLGEKSLEALKTARSWDRFASIDDVVQRTKLQRADALQLARAGAFGCWEPDRRRAAWVAMRAVGDSLPLAPARQTSYNPRALTRDELIFLDYFSVGISVSGHPMEHLREKLRAAGALDSRELEQLEGGESIVTAGLVTIRQQPQSAKGTVFLLMEDEFGFINVIVSKRMVEKYCEVVKFSTFVVVQGKFERDGGVRNVIGKRFSELKVKELVHASRDFH*