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PLM0_60_b1_sep16_scaffold_679

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_679_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..441
DNA (441bp) protein (147aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-dehydroquinate synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y5_GEMAT
3-dehydroquinate synthase
PLM0_60_b1_sep16_scaffold_679_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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438..1253
DNA (816bp) protein (272aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003656568
3D domain-containing protein
3D domain-containing protein {ECO:0000313|EMBL:AHG90068.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1332..1520
DNA (189bp) protein (63aa)
Uncharacterized protein Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7P8_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90067.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1629..2876
DNA (1248bp) protein (416aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:BAH37644.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_679_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2912..3436
DNA (525bp) protein (175aa)
hypothetical protein Tax=Thiothrix flexilis RepID=UPI000380D4BD
diacylglycerol kinase catalytic region
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:AHG89882.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3450..4976
DNA (1527bp) protein (509aa)
Glycolate oxidase subunit GlcD Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
FAD linked oxidase domain protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AHG90062.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4973..6103
DNA (1131bp) protein (377aa)
Glycolate oxidase subunit GlcE Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y1_GEMAT
FAD linked oxidase domain-containing protein
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:AHG90061.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6147..7409
DNA (1263bp) protein (421aa)
Glycolate oxidase iron-sulfur subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
protein of unknown function DUF224 cysteine-rich region domain protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7443..8441
DNA (999bp) protein (333aa)
Putative aminomethyl transferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5X8_GEMAT
folate-binding protein YgfZ
Folate-binding protein YgfZ {ECO:0000313|EMBL:AHG90057.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_10
unknown

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comp(8472..8681)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_679_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8867..10315
DNA (1449bp) protein (483aa)
Magnesium chelatase subunit ChlI Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5X5_GEMAT
magnesium chelatase subunit ChlI
Magnesium chelatase subunit ChlI {ECO:0000313|EMBL:AHG90055.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_679_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10517..10945
DNA (429bp) protein (143aa)
Cytidylate kinase 2 Tax=Clostridium sp. (strain SY8519) RepID=F7V8G0_CLOSS
Cmk; cytidylate kinase 2
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM0_60_b1_sep16_scaffold_679_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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10964..11569
DNA (606bp) protein (202aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I Tax=Geobacter sp. (strain M18) RepID=E8WJT3_GEOS8
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM0_60_b1_sep16_scaffold_679_14
unknown

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comp(12108..12218)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_679_15
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(12252..12956)
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AFY3_FLELS
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFM02868.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
PLM0_60_b1_sep16_scaffold_679_16
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12947..14011)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI00030E5976
Threonine aldolase {ECO:0000313|EMBL:KFA93740.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
aromatic amino acid beta-eliminating lyase/threonine aldolase
PLM0_60_b1_sep16_scaffold_679_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14073..17231)
DNA (3159bp) protein (1053aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Error-prone DNA polymerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH7_GEMAT
DNA polymerase III, alpha subunit
PLM0_60_b1_sep16_scaffold_679_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17573..18067
DNA (495bp) protein (165aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V9_GEMAT
Protein of unknown function DUF2723
Uncharacterized protein {ECO:0000313|EMBL:AHG90525.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 18 items

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