ggKbase home page

PLM0_60_b1_sep16_scaffold_1047_15

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(12423..13148)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 233.0
  • Bit_score: 355
  • Evalue 3.10e-95
Ribonuclease PH Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 234.0
  • Bit_score: 347
  • Evalue 7.80e-93
Ribonuclease PH similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 233.0
  • Bit_score: 355
  • Evalue 6.20e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 726
GTGAAAGCAAGTAAGCCAGGACGAGAGGGTCGCAGCGCATCGGACTTGCGGCCAATCACATTCGAGCGGGGAGTCGCACCGTACGCCGAGGGCTCTTGCCTGATCACCTTCGGCGCCACCCGCGTTCTCTGCACCGCTTCCGTCGAGGAGGGAGTGCCCGCCTGGAGACGCGGCCGTGGAGAGGGCTGGCTCACCGCCGAGTACGCCATGCTGCCGCGCGCCACGAGAACGCGCACCGTGCGGGAGAGGGCGCAGCTGGGCGGACGCACGCAGGAAATCCAGCGTCTCATCGGCCGTAGTATTCGCGCGATGTTGGATGATTTCAAGTTTGGCGAGTTCACGGTGAAACTCGATTGTGACGTCCTCGTGGCGGACGGAGGCACGCGCACCGCGGCGGTAACGGGTGCGAGTGTTGCCATTGTCGACGCATTCGATTGGATGGTGGAGAACGCTATGCTCCAACAGACGCCGATCAAGCGTCGCGTTGCCGCGGTTAGTGTTGGTGTCATTGACGGCGAGGCGCGTCTCGATCTCGACTACGAGGAGGATGTGCGCGCCGAAGTGGACATGAACGTCGTCATGAGCAGTGAAGGAAAGTTCGTGGAAGTGCAGGGTACAGGCGAGCACGGAACCTTCGATCGAGGTCAGCTCGACAGCCTGCTCGAGCTCGCGATCTCTGGCATTCGCACCCTTGACGCCGCACAGACGAAAGCGCTGGCGGAGTGA
PROTEIN sequence
Length: 242
VKASKPGREGRSASDLRPITFERGVAPYAEGSCLITFGATRVLCTASVEEGVPAWRRGRGEGWLTAEYAMLPRATRTRTVRERAQLGGRTQEIQRLIGRSIRAMLDDFKFGEFTVKLDCDVLVADGGTRTAAVTGASVAIVDAFDWMVENAMLQQTPIKRRVAAVSVGVIDGEARLDLDYEEDVRAEVDMNVVMSSEGKFVEVQGTGEHGTFDRGQLDSLLELAISGIRTLDAAQTKALAE*