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cn_combo_scaffold_153_83

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(81585..82409)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=861299 species="Bacteria; Gemma similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 265.0
  • Bit_score: 282
  • Evalue 6.40e-73
Shikimate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A913_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 282.0
  • Bit_score: 225
  • Evalue 8.70e-56
Shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 265.0
  • Bit_score: 282
  • Evalue 1.30e-73

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 825
GTGACGGGGCACCGTCCCGGGCGGCTGGTCCTCATCGGCCACCCGGTGGCCCACTCGTTGTCACCTGCCTTCCAGAACGCCGCGCTGCGGGACGCCGGGATCCCCCTCACCTACGAGGCGCTGGACGTTCCACCCGCGGCCTTGCCCCACGCCTTGCGCCTCCTGCGCACCCAGCGCGCGGCAGGAAACGTCACCGTCCCGCACAAGGAATCGGTCTTCACCGCCTGCGATGTGCTGACGCCGCTGGCCAGGCGCGTCGGTGCGGTGAATACCTTCTGGACCCGCGACGACGACGCCCTGGTCGGCGACAATACCGACGTCGCGGGCTTCGAGGCCCTGGCCGACGCCCTCGGCGTCGTGCGGGCGCATTGCGTGGTCGCGTGCATGGGGAGCGGGGGCGCCGCGTCGGCGGTCTGCGCCGCGGTGGAGCAGTGGCCGGGAGCCCTCGTGCGACTGTGGGCGCGAACCCCACAGCGCGCGCGCGCGCTGGCCGCCCGATTCGGCGATCGCGTCCGGGTCGCGCCGTCGCTTCGAGACGCGCTGGACGGCGCCCAGCTCGTGGTCAACGCCACTCCCCTGGGGCTGCGCGACGAGGACGTCCCGGTCGCGCCCGACCAGCTGCCGCGTGACGCTCGCGTGATGGACCTGGTGTATCGTCGCGGCGAGACGCGCTGGGTACGGGAGGCGCGGCGTGCAGGTCATGCCGCGTGCGACGGACGGGAGATGCTCCTGGTGCAGGGGGCCGCGGCCTTCGAGCAATGGTTCCATCGTCCGCCCCCCCTGGAGGTCATGCGACGCGCACTGGAGGCGGCCGCCGCGCGATAG
PROTEIN sequence
Length: 275
VTGHRPGRLVLIGHPVAHSLSPAFQNAALRDAGIPLTYEALDVPPAALPHALRLLRTQRAAGNVTVPHKESVFTACDVLTPLARRVGAVNTFWTRDDDALVGDNTDVAGFEALADALGVVRAHCVVACMGSGGAASAVCAAVEQWPGALVRLWARTPQRARALAARFGDRVRVAPSLRDALDGAQLVVNATPLGLRDEDVPVAPDQLPRDARVMDLVYRRGETRWVREARRAGHAACDGREMLLVQGAAAFEQWFHRPPPLEVMRRALEAAAAR*