ggKbase home page

cn_combo_scaffold_231_101

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(112600..114003)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 449.0
  • Bit_score: 436
  • Evalue 2.50e-119
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 449.0
  • Bit_score: 436
  • Evalue 7.00e-120
Outer membrane efflux protein {ECO:0000313|EMBL:BAH38358.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 449.0
  • Bit_score: 436
  • Evalue 3.50e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1404
GTGAAACTCAGTTCTTTCTGCTGGCGAGATCGGCGCGTAGGCGCACTCGTCCGCACAGCTGGCTTGGCCACCACGGCCGTGCTCGCCGGTATCGGAATGCCCGGTCGCGCCGTTGCGCAGACGTCGTCAGCTTCCGCAGCCGGCGACCGCGACACACCCGCTCGTCAAGCGCCCTCTCTGGTGCTCGGCGCGCTCTACCGGCAGCTCGCCACCGCGAGTCCGCGGCTCGAGGCCGCTCGGGCATTGGCCCGTGCCGCCGAGGCGCGCGTGCCCGGCGCCAAGCGTCCGCCCGATCCACTGCTCCAGCTCGGCTTCATGAACCGCGAGTTGCCGTCGCTGAAGTCGATGGACCCGCTCGGCATGACGCAGCTACAGCTCATCCAGATGATCCCTGTGGCGGGCAAGCTCGGTCTGGCCGGTGACGTGGCTGAGGCGCAGGCGGCGGCGGCCCGCAGCCGCGCCGCCGACGTCCGGTGGGACGTCCGCGCCCAGGCAGCGATGGCCTTCTATGACCTGTACCAGACCGACCAGTCGCTCGACGTGGCAATCGCGACGCGGCGGCTCCTGCAGGACATCGCCACGACCGCGCAGACCATGTATGCGGTGGGTGAGGGACGGCAGCCGGACGTGCTCCGCGCGCAGGTCGAGATCGCCCGCATGACAGAGGACATCGTCCGCATGGAGACGATGCGCACCAGCATGGACGCACGGCTCGCGGGGTTGCTCAACCGCGCCCCGCAGGCCGATCCGGCCTCGCCCGTGCTCCCGGCGCTGCCGACCGAACTGCCGCCGCTCGACTCGCTGATCTGGCTGGCCCAGGCGAACCGCCCAATGATTCAAGCGGGGCGTGAGGAGCTGCGGGGGGCGGAAGCGGCCGCGACGCTCGCTCGCCGGGAGCTGTGGCCCGACCTCGAGGTCGGCGTACAGTACGGCTGGCGGGCGGGCCCAGTGGGCATGGGGAACGAGCAGATGGGTAGCCTGATGCTCGGGGCCAGTCTCCCGATCTTCGCCCGGAGCCGCCAGCTCCAGATGCGCGAGGAGGCGACGGCCATGCGAACCATGGCGGCGGCGGACCTCACGGCCATGCGCGCTGAAACTGCCGGGCGCGTCGCTGGCGCGTACGCGGATTGGCGCCGCGCGCGCAACCTGAGTGACCTCTATCGCAGCACCATCCTGCCGCAGGCCCAGGCGACCATCACGTCCTCGCTCGCCGCGTACCGGGTGGGCGACGTGAACTTCATGACGCTGCTCGACAATCAGATGACCCTCAACCGCTACCAGCAGGAGCTCTTCGTGCTCGTGGCGGAGCAGGGCAAGGCGGTGGCCGACCTGGAGATGCTGATTGGTCGCGAGCTGTTCGACCCGAACGTGGTGGCCGCTCCCGCGGCCGGGAGCAGAAGATGA
PROTEIN sequence
Length: 468
VKLSSFCWRDRRVGALVRTAGLATTAVLAGIGMPGRAVAQTSSASAAGDRDTPARQAPSLVLGALYRQLATASPRLEAARALARAAEARVPGAKRPPDPLLQLGFMNRELPSLKSMDPLGMTQLQLIQMIPVAGKLGLAGDVAEAQAAAARSRAADVRWDVRAQAAMAFYDLYQTDQSLDVAIATRRLLQDIATTAQTMYAVGEGRQPDVLRAQVEIARMTEDIVRMETMRTSMDARLAGLLNRAPQADPASPVLPALPTELPPLDSLIWLAQANRPMIQAGREELRGAEAAATLARRELWPDLEVGVQYGWRAGPVGMGNEQMGSLMLGASLPIFARSRQLQMREEATAMRTMAAADLTAMRAETAGRVAGAYADWRRARNLSDLYRSTILPQAQATITSSLAAYRVGDVNFMTLLDNQMTLNRYQQELFVLVAEQGKAVADLEMLIGRELFDPNVVAAPAAGSRR*