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cn_combo_scaffold_422_77

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 108109..109806

Top 3 Functional Annotations

Value Algorithm Source
outer membrane efflux protein id=12557722 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 510.0
  • Bit_score: 383
  • Evalue 5.10e-103
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 431.0
  • Bit_score: 325
  • Evalue 2.80e-86
Outer membrane efflux protein {ECO:0000313|EMBL:BAH40134.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 431.0
  • Bit_score: 325
  • Evalue 1.40e-85

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1698
ATGCGACTCGACTCCATCCTTCCCGATTCCATGAAGTCCTTGCACCTGGGCGTTGCCCTGGCGGCGGCGCTGATGGCGGTGTCCGGCCGCGCCGCGGGCCAGGCGGCTCGCCCCCTGTCGCTCGAAGACGCGTTGCGGCTGTCACAGGCGCAAAGCGAGGCGCTGCGCATCGCCGGGGCCGGCGTGATGCGCGCCCGCGGCCAGCAGCTGCAAGCGCGCGCCCAGTACCTCCCGCAGGTCAACGGCTCGATTGGCTACACGCGGACCCTCGCCACGCAGTTCTCGGCGCTCTCCGATGGCAGCTCGCCCGCGCCGCCCCCCACCGTGCCCCCCGTCCCCCCGCACGACACGGTGACGTACTTCCAGCCCTGCTCGCGCTACCTCGCCCCTGCGGGGGCGGCGGATGCCGCGCGCATCGCCGGGCTCGAGCTCTTCTCGCGCTGCTCGTCGAGCGGGGGGATCGACTTCTCCAAGGTCGGCTTCGGCGCCCAGAACCAGTACCAGCTGGCAGCCACCGGCTCCATGACGCTCTGGTCCGGCGGGCGCGTGCAGGCGCAGAACCGCGCCGCGAGCGCGGGGCGCCGCTCGGCGGAGATCGAGCTCACCTCGCAGAAGGCGCAGCTGGCCCTCGACGTCACGCAGGCGTACTACGACGCGGTCCTGGCCGAGCGGCTGGTGGCGATCGCCGAGTCGTCGCTGGTGTGGACCGAGGGGACGCTGCGGCAGACCACGCTGGCCCGGCAGGTGGGGAACCAGTCGGAGTTCGAGCTGCTGCGGGCGCGGGTGACGCGCGACAACCAGGTCCCGGTGGTGCTGCAGCGCCGCACCGACCGCGACCTCGCGTACCTGCGCCTCAAGCAGCTCCTCAACCTGCCGCAGGGCGAGCGGCTGCAGCTGACGAGCGGGATCGACGAGCCGGCCGAGCCGGCCACGCTGCGCTCGGCCGCCAACGTGGCGCCGTCGGCGCTGGCGGGCGAGGCCGACACCAGCGTCTCCAGCCGCGCCGCGGTGCGCCAGCTCGACCAGGCGCTGCTGGCGCAGGAGGCGCAGCTGACCATCGCCAGCCGCGAGTGGGTGCCGAGCATCAGCGTCTCGTCGGCGTACAGCCGGGTGGCGTTCGGGCGCGGCGCCCCGCCGGCGTGGGGCAACTGGCTCAACAACTGGACCGTCTCGTTAGGCGCGAGCTTCCCGCTGTTCGCCGGCGGGCGCATCCGCGGCGGCGAGCTGGTGGCGCGGGCCGGCGTCGAGGAATCGCGCGCCCGCCTGGACCAGGCGCGCGAGCTGGCGGCGCTCGACGCGCAGCAGACCCTCGCCCAGTTGCAGCAGGCGGAGGCCGCGCTGGCGGCCAGCGCGGGGACGGTCGAGCAGGCCGCCCGCGCCTACACCATCGCCGACGTCCGCTACCGCGAGGGGATCTCGACGCAGATCGAGCTTTCCGAGTCGCGGCTCAACCTCGAGCAGGCCCGCATCAACCGGGCGCAGGCCGCGCGCAACCTGCAGGTGGCGCGCATGCGGCTGGCGTTGCTCCAGGACCTCCCGTTAGGCGGCGGCGGCGCGCTCGGCGGTGCCGCCACGGGAGGCGGCTTCGCCGCCCCGGGCGTCACCGGCGGCGGGCTGGGCGGCGGCATGGGCGGCAGCGCACCGCAGGGCACGCGCATCACCACGCAGCAGGCATCGACTTCCCAGGTCCCTCAATAA
PROTEIN sequence
Length: 566
MRLDSILPDSMKSLHLGVALAAALMAVSGRAAGQAARPLSLEDALRLSQAQSEALRIAGAGVMRARGQQLQARAQYLPQVNGSIGYTRTLATQFSALSDGSSPAPPPTVPPVPPHDTVTYFQPCSRYLAPAGAADAARIAGLELFSRCSSSGGIDFSKVGFGAQNQYQLAATGSMTLWSGGRVQAQNRAASAGRRSAEIELTSQKAQLALDVTQAYYDAVLAERLVAIAESSLVWTEGTLRQTTLARQVGNQSEFELLRARVTRDNQVPVVLQRRTDRDLAYLRLKQLLNLPQGERLQLTSGIDEPAEPATLRSAANVAPSALAGEADTSVSSRAAVRQLDQALLAQEAQLTIASREWVPSISVSSAYSRVAFGRGAPPAWGNWLNNWTVSLGASFPLFAGGRIRGGELVARAGVEESRARLDQARELAALDAQQTLAQLQQAEAALAASAGTVEQAARAYTIADVRYREGISTQIELSESRLNLEQARINRAQAARNLQVARMRLALLQDLPLGGGGALGGAATGGGFAAPGVTGGGLGGGMGGSAPQGTRITTQQASTSQVPQ*