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cn_combo_scaffold_651_11

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(10759..11331)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 198.0
  • Bit_score: 151
  • Evalue 8.50e-34
rpoE; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 198.0
  • Bit_score: 151
  • Evalue 1.20e-33
rpoE; ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 176.0
  • Bit_score: 146
  • Evalue 7.70e-33

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Taxonomy

R_Ignavibacteria_55_14 → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 573
ATGACGAGCCAGTCCGATGCGAAGCGTCGCGCGGCGTTCGAGCGCGAGGCGCTGGTGCACCTGGATGCGCTGTACAACTTCGCATTCAAGCTCTCGCGCTCGCGCGACGATGCGCAGGACCTGGTGTCCGACACGATCCTGCGCGCGCTGGAGCGCTGGGAGCAGTACCATCTCGGGTCCAACATCCGGGCGTGGCTGTTCACGATCCTCTACCACATCTTCGTCAGCCGCAAGCGCCGCATCGACGCGCGCGAGGTGCTGGCGCCGGACGATGCGGAGGGGAATCCCGCCTTCGAGGCGGTGGGCGAGACCGACCCCGAGGGGGCGTTCTACGACTCGTTCATCGACGAGAAGGTCGTGGAAGCCATCGAGGCGCTCCCCGACGAATACCGGACGTCGGTCATGCTGAGCGACGTGCAGGGGATGCGCTACTCCGAGATCGCCTCGGTGCTTGGCGTCCCCGAGGGGACGGTCAAGTCGCGCCTCTTCCGCGGGCGGCGGATCCTGCAGCGGAAGCTTCGCGCCTACGCCGCGGAGATGGGGTACATCCGCGTGGTGCCCAGCGAGGCCTAA
PROTEIN sequence
Length: 191
MTSQSDAKRRAAFEREALVHLDALYNFAFKLSRSRDDAQDLVSDTILRALERWEQYHLGSNIRAWLFTILYHIFVSRKRRIDAREVLAPDDAEGNPAFEAVGETDPEGAFYDSFIDEKVVEAIEALPDEYRTSVMLSDVQGMRYSEIASVLGVPEGTVKSRLFRGRRILQRKLRAYAAEMGYIRVVPSEA*