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cn_combo_scaffold_692_23

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(28367..30178)

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 578.0
  • Bit_score: 335
  • Evalue 1.30e-88
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 593.0
  • Bit_score: 442
  • Evalue 2.20e-121
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG89519.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 593.0
  • Bit_score: 442
  • Evalue 1.10e-120

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1812
ATGCGACTGCCCCTCATCGAGAGAACTCTGGTGAATCGTTCGTCCCTCGGCTCGCTCCTGACGATGCTGGCCCTCGTTTCCCTTGCCGCCTGCGCCAGGAAGGAGGAGCAGAAGCTCACGATCCAGACGTCCACCGTCGCGCGGCGTACCATCATCCTCGACGCCACGGCTTCCGGGGCGGTGGAACCGATCAACGTCGTCGAGGTAAAGTCGAAGTCCTCGGGACAGATCACCAGCATGCCGGTGGAGACGGGGTCGGAGGTCCGCCCGGGAGACCTCCTGGTGCAGCTGGATACGCGCGACGTGCAGAACCAGTACGACCAGGCCGAGGCCGACCTCAAGGCGGCCGACGCGCGGTTGCAGGTGTCGGAGGCGCAGCGGAAGCGCTCCGACGACCTGTTCCGGCAGCGCATCATCACGGCCCAGGAGAACGAGACGGCCCAACTCGACTACGCCAACGCCCAGGCCGCCGTCATCCGCGCCCGCACCTCGCTCGACCTCGCCAAGCAGCGTCTCGAGGACGCGACCGTGCGCGCCCCCGTGGCCGGAACGGTGATCGAGAAGACCGTCTCGCTCGGCCAGGTGATCACGTCGGCCACCAGCGCCTTCGGCGGCGGCACGACGCTCCTGAAGATGGCGGACCTCAGCAAGGTGCGGATGCGCGCCCTGTTCAACGAGACCGACATCGGGAGCGTGCAGGGCGGGCAGCAGGCCACGGTGACCGTGGATGCGTACCCGGACCGCCCGTTTCGCGGGACGGTGGAGAAGATCGAGCCCCAGGCGGTGGTACAGCAGAGCGTGACGATGTTCCCGGTGCTCATCAACCTCGCCAACCTGGAGGGGCTGCTGAAGCCGGGAATGAACGGCGAGGCGTCGGTCCTGGTCGACCGTCGCGAGAACGTCCTCGCCGTCCCCAACGACGCCGTGCGCACGACGCGCGAGGCGCCGATGCTGGCCAAGTCGCTCGGGCTCGACCAGGACAGCGTGAGCGCGCAGATCCAGGCGCAGATGGCGTCGTTCGGCGGGATGGGACGCGGCAACGGGGCCAACGGTGAAGGCGGGATGAACATCGCCACCCCGCGGGAGATGCGCCGCATGATGCGCGGCGAGGTGGAGCTTGCCCCCGAACCACCCCAGCAGGGCGGGCGCGGGCAACTCCCGGCCGTCGGCGATGCCGACTGCAAGAAGGTGAGCGACGCCATGGCGGCCAAGCCCGAGGTCGCACGGCAGCTCGCGGCGCTGCGCCAGAAGATGCAGAGCGGCGAGATCGACATGGCGGCGCTGCGCCAGGAGTCGCAGAAGGCGTACGCGGCCCTTGGCGTGGATCCCATGGTGGCGCGCGCATGCCAGCAACGCTCCGGGACGCCGGGCCCCGCGCCAGCCGCTGCGGCTGGCGGGACGGCACAGGCGGCGGGTCGGCCGAGCCGGGCGGCGCAGGGCGCCGGAGTGCCGTCGGGACGCGCTGCGCAGGGGGGCGCCGCCGTCCCGCAGGCGCAAGGGGAGTTCCCCTCGCGCGCGCGCACCCGCCCGGGCGTCGTCTTCGTGAAGGGAGGGACCGGGTTCGAGGTTCGCGTGGTGCGACTCGGTCTCGGCAACTTCGATTACACCGAGGTGGTGGGCGGACTCGAGGAAGGCGACGAGGTCGCCCTCCTCGGCGCCGCCGCGATCCAGGTGTCCCGCGACTCCAGCGCCGCGCGGTTCCGCCAGATGACGGGTGGCGGGATGCCGGGCATGCAGCGCCAGCAGCAGGGCGGCACCCAGCAGGGTGGCGCCCAGCAGGGTGGCGGGGCCGCCCCGTCGCCGCGTCGATAA
PROTEIN sequence
Length: 604
MRLPLIERTLVNRSSLGSLLTMLALVSLAACARKEEQKLTIQTSTVARRTIILDATASGAVEPINVVEVKSKSSGQITSMPVETGSEVRPGDLLVQLDTRDVQNQYDQAEADLKAADARLQVSEAQRKRSDDLFRQRIITAQENETAQLDYANAQAAVIRARTSLDLAKQRLEDATVRAPVAGTVIEKTVSLGQVITSATSAFGGGTTLLKMADLSKVRMRALFNETDIGSVQGGQQATVTVDAYPDRPFRGTVEKIEPQAVVQQSVTMFPVLINLANLEGLLKPGMNGEASVLVDRRENVLAVPNDAVRTTREAPMLAKSLGLDQDSVSAQIQAQMASFGGMGRGNGANGEGGMNIATPREMRRMMRGEVELAPEPPQQGGRGQLPAVGDADCKKVSDAMAAKPEVARQLAALRQKMQSGEIDMAALRQESQKAYAALGVDPMVARACQQRSGTPGPAPAAAAGGTAQAAGRPSRAAQGAGVPSGRAAQGGAAVPQAQGEFPSRARTRPGVVFVKGGTGFEVRVVRLGLGNFDYTEVVGGLEEGDEVALLGAAAIQVSRDSSAARFRQMTGGGMPGMQRQQQGGTQQGGAQQGGGAAPSPRR*