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cn_combo_scaffold_892_6

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 5022..5522

Top 3 Functional Annotations

Value Algorithm Source
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 164.0
  • Bit_score: 150
  • Evalue 1.80e-33
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A895_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 166.0
  • Bit_score: 128
  • Evalue 8.80e-27
chemoreceptor glutamine deamidase CheD similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 160.0
  • Bit_score: 128
  • Evalue 1.90e-27

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 501
ATGAGCGACATCTCGCCTTCCCCGCTCGAACTCCACGTCAACGTGGGGCAGGCGGCCGTGCGCCGTGACCACGGCGTCCTGTCGTGCATCGGGCTCGGCTCGTGCGTGGCGCTGATCCTCTACGATCGCGCGGCCCGCGTCGGGGCCGTCGCCCACATCCTGCTGCCCAACGAGGCCCTCTCGCGCGCGCGCGGGGGGCCGGCCAAGTACGCGAGCACCGCCGTCTCCTACCTGCTGGACGAGATGCGCGCGATCGGGGCCGTCGAGGCGCCCGACGCCCGGCTGGTGGGCGGCGCGAGCATGTTCACCGGCATCCTCAACGGCGCCGGGGTCAACATGGGCGAGCGCAACGTGCAGGCGACGCGGCGCGCGCTCGCCGCCGTGGGCGTGCCGATCATCGGCGAGGAGGTCGGCGGGAACCATGGACGCAGCGTCTTCCTCGACGTGGCCACGGGCGTGGTGCGCGTGACGTCGATCCGCCATGCCGAACGCATCCTGTAG
PROTEIN sequence
Length: 167
MSDISPSPLELHVNVGQAAVRRDHGVLSCIGLGSCVALILYDRAARVGAVAHILLPNEALSRARGGPAKYASTAVSYLLDEMRAIGAVEAPDARLVGGASMFTGILNGAGVNMGERNVQATRRALAAVGVPIIGEEVGGNHGRSVFLDVATGVVRVTSIRHAERIL*