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cn_combo_scaffold_1226_7

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 7491..8036

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Amycolatopsis RepID=UPI0002625E1A similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 173.0
  • Bit_score: 142
  • Evalue 4.90e-31
Ribosome maturation factor rimM similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 171
  • Evalue 2.80e-40
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 171
  • Evalue 1.40e-39

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 546
GTGTCCGCGTCGCCGCACGGCGGGGCGTCGCACGCCATCGTTGGTCGCGTGCGGCGCGCCCATGGGGTGCGGGGCGAGCTGTACCTCGAGGTGATGACCGACGCGCCGGACGCGATCTTCGCGCCCGGCGCGCGCCTTTTCGCCGGCACCACCGCCGGCGACCTGGCGCGGGATGGTGCGACGCTCACGGTGTCCGGCGTGCGCCCGTTCAAGGACGGGCTCCTCGTCACCTTCGAGGAGATCCGCGACCGGAACGCGGCCGACCTCTGGCGCGAGCGCTACCTCCTCCTCCCCCTCGACGAACTCCCGCCCCCGGGCGAGGACGAGGTGTTCCTGCACGACCTGGTGGGGCTGCGGGTGCAACGTGCCGACGGGACGCCGGTCGGGACGGTGGTCGCCTACTACGAGCTTCCCCACGACATCCTGCTCGAGATCCAGCGCGACGGCTCGACCGTCCTCGTCCCCTACCGCGAGGAGTTCGTCACCGAGGTGGACGTCGACGGCGGCGTGCTCGTCGTCGCGCCGCCGGAGGGGCTCCTCGAATGA
PROTEIN sequence
Length: 182
VSASPHGGASHAIVGRVRRAHGVRGELYLEVMTDAPDAIFAPGARLFAGTTAGDLARDGATLTVSGVRPFKDGLLVTFEEIRDRNAADLWRERYLLLPLDELPPPGEDEVFLHDLVGLRVQRADGTPVGTVVAYYELPHDILLEIQRDGSTVLVPYREEFVTEVDVDGGVLVVAPPEGLLE*