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cn_combo_scaffold_2987_21

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(19131..19994)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 283.0
  • Bit_score: 294
  • Evalue 1.30e-76
tRNA pseudouridine synthase B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 296.0
  • Bit_score: 267
  • Evalue 2.10e-68
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 283.0
  • Bit_score: 294
  • Evalue 2.60e-77

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGCGAGCGACCTCGACTGACGCCCTCCTCCTCGTCGACAAGCCGGCGGGGCTCTCGTCGCACGACGTGGTGGCCCTCGCACGGCGCGCGTTAGGCACGCGCAAGGTGGGGCACGGCGGCACGCTCGACCCCTTTGCGACCGGGCTCCTCGTCCTCCTCGCCGGGCGCGGGACGCGCCTCCTGCAGTTCGTCCCGGCCGACCCCAAGGTGTACGAGGCGACCATCCGCTTTGGCCGCGAGACCGACACGGACGACGGCACGGGGACGACGACCGCCGAGGCCCCAGCCCCCGAGCCGGCGCGCGTCGTGGCCGCGCTCCCCGCCCTCACCGGCGCCCTCCAGCAGGTCCCCCCCGCCTTTTCCGCCAAGCACGTCGGCGGCCAGCGCGCGTATGCCCTCGCGCGCCGCGGCGAGCCCGCCGAACTCCCCCCCGTCCCGGTGCGCGTCGACGCGTGGGAGGTGCTGGAGCTGGCGCCAGGACTCCTCCGGGCCCGGATCACCTGCGGCACGGGGACGTACATCCGTTCGCTCGCCCGCGACCTGGGGCGCGCCACCGGGTCGGCGGCCCATCTCGAGGCGCTGCGCCGCGTGCGGGTGGGGCCCTTCGGCGTGGCCGAGGCCGATGGCATCGACGCGCTGCGCGCCGGCCAGGTGCAGCGTCACGAGCTGCGGGAGGCGTTAGGCGACTTGCCCGTGCAGGTCCTCACGGGCGATGAGGTGCGGCGCGCGCGGCACGGCATGCATGTCCCGGCCACCGTGGGCGGAGCGCGAGCGGCCCTGGTCGATGTGCACGGCGAGCTCGTCGCGGTCGCGTCACGGGACGATGCCTCCTGGCACCCGGACGTAGTCCTCCCCATCGACTGA
PROTEIN sequence
Length: 288
MRATSTDALLLVDKPAGLSSHDVVALARRALGTRKVGHGGTLDPFATGLLVLLAGRGTRLLQFVPADPKVYEATIRFGRETDTDDGTGTTTAEAPAPEPARVVAALPALTGALQQVPPAFSAKHVGGQRAYALARRGEPAELPPVPVRVDAWEVLELAPGLLRARITCGTGTYIRSLARDLGRATGSAAHLEALRRVRVGPFGVAEADGIDALRAGQVQRHELREALGDLPVQVLTGDEVRRARHGMHVPATVGGARAALVDVHGELVAVASRDDASWHPDVVLPID*