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cn_combo_scaffold_3361_3

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(3833..4627)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 262.0
  • Bit_score: 277
  • Evalue 2.60e-71
Formamidopyrimidine-DNA glycosylase/AP lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A643_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 265.0
  • Bit_score: 212
  • Evalue 7.40e-52
formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 262.0
  • Bit_score: 277
  • Evalue 5.20e-72

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 795
GTGCCCGAGCTCCCCGAGGTCGAATACGCGGCGCGGATCGCCCGCGCCGCGTGCCAGGGCAAGCGCATTCGAGAGGTGCGATCCTGCCACCCCTCGCAACGGCGGACCCTCCCCGATGTCGTCGCACGGACGCTCGCGGGAGACGTGGTGCGCGAGGTGCGCCGCTGCGGGAAGCACCAGCTCTTCCAGCTGGCGAGCGGGCGCACCATCCACGTGCACTTCCGCATGACGGGTGACTGGTCGGTGGGCGAGGCAGCGCCTCCCGTGCACCGGTTCGCGCGCGTCATCCTCGACTTCGACGACGGGACGCGGCTCGCCCTCGTCGACACCCGTGCGCTGTCGCACGTCTCCGTGCACGCGGCGGGCGAATCCCCGCTCCCCGACCTCGGCCCCGAGGCCACCGCGCCGGAGTTCGACGCGGCATGGCTGGCCGCGCACCTCGCGCGACGTCGCGCCCCCGTCAAGCCGATTCTCCTCGACCAGCGCGTGGTGGCCGGGATCGGGAACATCTATGCGTCCGAGGCGCTCTGGTACGCCCGCGTCGATCCCCGTCGCCCGGCGCACCGTCTCTCGAGCGACCGGGTCGCCGCCATCGTGGCTGGCGTCAAGCGCACCATGCGCAAGGCGCTCGCGCACCCCGAGCGCTACCACGGCGCCGCTGCGGTGCGCGACGCGGTCCGCTTCAACGTCTACGATCGCGAGGGACGCCCCTGCCGACGTTGTCGTGCCCCCATCTCACGGCTCACGCAGGCAGGGCGCAGCACCTACTTCTGCCGCAGCTGCCAGAAGGGATGA
PROTEIN sequence
Length: 265
VPELPEVEYAARIARAACQGKRIREVRSCHPSQRRTLPDVVARTLAGDVVREVRRCGKHQLFQLASGRTIHVHFRMTGDWSVGEAAPPVHRFARVILDFDDGTRLALVDTRALSHVSVHAAGESPLPDLGPEATAPEFDAAWLAAHLARRRAPVKPILLDQRVVAGIGNIYASEALWYARVDPRRPAHRLSSDRVAAIVAGVKRTMRKALAHPERYHGAAAVRDAVRFNVYDREGRPCRRCRAPISRLTQAGRSTYFCRSCQKG*