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H3-18-all-fractions_k255_959708

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_959708_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1293)
DNA (1293bp) protein (431aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000346F249
DNA topoisomerase I
H3-18-all-fractions_k255_959708_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1535..4279
DNA (2745bp) protein (915aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00035ED342
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
H3-18-all-fractions_k255_959708_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4369..5595
DNA (1227bp) protein (409aa)
Metallophosphoesterase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZA4_HERA2
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AHG92366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_4
R_NC10_66_22, NC10, Bacteria

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comp(5552..6100)
DNA (549bp) protein (183aa)
Uncharacterized protein id=4316658 bin=GWC2_Nitrospirae_57_13 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
H3-18-all-fractions_k255_959708_5
CSP1_5_NC10, NC10, Bacteria

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6299..7324
DNA (1026bp) protein (342aa)
YVTN beta-propeller repeat-containing protein id=14429063 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
H3-18-all-fractions_k255_959708_6
unknown

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7676..8353
DNA (678bp) protein (226aa)

This feature has no annotations

H3-18-all-fractions_k255_959708_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8397..10220)
DNA (1824bp) protein (608aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A523_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87773.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10217..10945)
DNA (729bp) protein (243aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A524_GEMAT
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH37334.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_959708_9

Not on your lists

11166..11789
DNA (624bp) protein (208aa)
Marine sediment metagenome DNA, contig: S12H4_C02617 {ECO:0000313|EMBL:GAI59109.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acetyltransferase id=24577501 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
acetyltransferase
H3-18-all-fractions_k255_959708_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11862..13613)
DNA (1752bp) protein (584aa)
acyl-CoA dehydrogenase (EC:1.3.99.3)
Acyl-CoA dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5D7_SORC5
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AKF06358.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
H3-18-all-fractions_k255_959708_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14050..14946
DNA (897bp) protein (299aa)
Gll2018 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJ14_GLOVI
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:AHG87686.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15038..15256)
DNA (219bp) protein (73aa)
CsbD family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGR9_THET1
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:AHG87774.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_13
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15460..16170
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KB73_HALHC
Uncharacterized protein {ECO:0000313|EMBL:AHM59466.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
H3-18-all-fractions_k255_959708_14
unknown

Not on your lists

comp(16550..16828)
DNA (279bp) protein (93aa)

This feature has no annotations

H3-18-all-fractions_k255_959708_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17130..17789
DNA (660bp) protein (220aa)
Outer membrane protein-like protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8R6_9SPHI
protein of unknown function DUF4142
Uncharacterized protein {ECO:0000313|EMBL:AHG88795.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17892..18599)
DNA (708bp) protein (236aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFM1_THIDA
H3-18-all-fractions_k255_959708_17
unknown

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18776..19045
DNA (270bp) protein (90aa)

This feature has no annotations

H3-18-all-fractions_k255_959708_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19487..19882
DNA (396bp) protein (132aa)
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AHG93866.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_19
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19870..20616)
DNA (747bp) protein (249aa)
Putative xylanase/chitin deacetylase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LGC4_9CYAN
polysaccharide deacetylase
Tax=RBG_16_Chloroflexi_48_8_curated
H3-18-all-fractions_k255_959708_20
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20839..21252
DNA (414bp) protein (138aa)
ferredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030BF030
Ferredoxin {ECO:0000313|EMBL:KJH71266.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
H3-18-all-fractions_k255_959708_21
unknown

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comp(21301..21600)
DNA (300bp) protein (100aa)

This feature has no annotations

H3-18-all-fractions_k255_959708_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21948..22361
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89003.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_23
unknown

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22371..22583
DNA (213bp) protein (71aa)

This feature has no annotations

H3-18-all-fractions_k255_959708_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22580..23077)
DNA (498bp) protein (166aa)
Transcription factor n=1 Tax=Epstein-Barr virus (strain GD1) RepID=V5KTU8_EBVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91931.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_25
unknown

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comp(23180..23347)
DNA (168bp) protein (56aa)

This feature has no annotations

H3-18-all-fractions_k255_959708_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23583..24152
DNA (570bp) protein (190aa)
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AHG88707.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_959708_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

24152..24718
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Paenibacillus mucilaginosus RepID=F8F7R6_PAEMK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
H3-18-all-fractions_k255_959708_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24715..25350
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38950.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_959708_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

25417..26016
DNA (600bp) protein (200aa)
Methyltransferase type 12 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQW0_PSEUU id=5224280 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
type 12 methyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
H3-18-all-fractions_k255_959708_30
unknown

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26207..26902
DNA (696bp) protein (232aa)

This feature has no annotations

Displaying 30 items

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