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H3-18-all-fractions_k255_2869460

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-18-all-fractions_k255_2869460_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..195
DNA (195bp) protein (65aa)
ABC-2 type transporter n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAS6_ANADF
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ABC transporter
H3-18-all-fractions_k255_2869460_2
unknown

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comp(99..347)
DNA (249bp) protein (83aa)

This feature has no annotations

H3-18-all-fractions_k255_2869460_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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804..2255
DNA (1452bp) protein (484aa)
permease n=1 Tax=Kribbella catacumbae RepID=UPI00037BF6CE
Xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:AHG93902.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_4
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2262..2624)
DNA (363bp) protein (121aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KFH6_SHEWM
Uncharacterized protein {ECO:0000313|EMBL:KFE35216.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
TraR/DksA family transcriptional regulator
H3-18-all-fractions_k255_2869460_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2621..4234)
DNA (1614bp) protein (538aa)
Peptide chain release factor 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB60_GEMAT
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_2869460_6
unknown

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comp(4610..4768)
DNA (159bp) protein (53aa)
hypothetical protein
H3-18-all-fractions_k255_2869460_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5026..6435
DNA (1410bp) protein (470aa)
Selenium-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ66_RUBXD
selenium-binding protein
Selenium-binding protein {ECO:0000313|EMBL:AHG88159.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6488..7123
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035C4B1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88158.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_9

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comp(7106..8338)
DNA (1233bp) protein (411aa)
Glycosyl transferase, family 9 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BUT5_9ZZZZ
Glycosyl transferase, family 9 {ECO:0000313|EMBL:EQD72358.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycosyl transferase family protein
H3-18-all-fractions_k255_2869460_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8537..9331)
DNA (795bp) protein (265aa)
S-isoprenylcysteine methyltransferase-like protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9F2_NITWC
phospholipid methyltransferase
Phospholipid methyltransferase {ECO:0000313|EMBL:AHG92559.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9328..10155)
DNA (828bp) protein (276aa)
tRNA (cmo5U34)-methyltransferase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PZQ4_9RHIZ
tRNA (cmo5U34)-methyltransferase
tRNA (Cmo5U34)-methyltransferase {ECO:0000313|EMBL:AHG92560.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10169..11368)
DNA (1200bp) protein (400aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:BAH40887.1}; EC=2.5.1.54 {ECO:0000313|EMBL:BAH40887.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG0_GEMAT
H3-18-all-fractions_k255_2869460_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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11690..12778
DNA (1089bp) protein (363aa)
Calcium/proton exchanger n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CG4_METCA
Calcium/proton exchanger {ECO:0000313|EMBL:CDI01565.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
cax-1; calcium/proton exchanger
H3-18-all-fractions_k255_2869460_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12845..13615)
DNA (771bp) protein (257aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
TonB family protein
TonB family protein {ECO:0000313|EMBL:AHG92255.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13749..14936)
DNA (1188bp) protein (396aa)
peptidase T2 asparaginase 2
Peptidase T2 asparaginase 2 {ECO:0000313|EMBL:AHG89954.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Peptidase T2 asparaginase 2 id=5017143 bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
H3-18-all-fractions_k255_2869460_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15133..17037
DNA (1905bp) protein (635aa)
Aspartate ammonia-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P8_GEMAT
aspartate ammonia-lyase
Aspartate ammonia-lyase {ECO:0000313|EMBL:AHG89952.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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17307..18398
DNA (1092bp) protein (364aa)
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
H3-18-all-fractions_k255_2869460_18
unknown

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18502..18891
DNA (390bp) protein (130aa)

This feature has no annotations

H3-18-all-fractions_k255_2869460_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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19337..20788
DNA (1452bp) protein (484aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N6_GEMAT
cytochrome c oxidase, subunit II
H3-18-all-fractions_k255_2869460_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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20868..22859
DNA (1992bp) protein (664aa)
Cytochrome c oxidase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N7_GEMAT
cytochrome c oxidase, subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:AHG89945.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22991..23659
DNA (669bp) protein (223aa)
ctaE; cytochrome c oxidase subunit III (EC:1.9.3.1)
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:BAH37548.1}; EC=1.9.3.1 {ECO:0000313|EMBL:BAH37548.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cytochrome c oxidase subunit III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N8_GEMAT
H3-18-all-fractions_k255_2869460_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23673..24029
DNA (357bp) protein (119aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N9_GEMAT
cytochrome C oxidase subunit IV
Cytochrome C oxidase subunit IV {ECO:0000313|EMBL:AHG89947.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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24184..25158
DNA (975bp) protein (325aa)
Putative CtaG protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P0_GEMAT
ctaG; putative CtaG protein
Putative CtaG protein {ECO:0000313|EMBL:BAH37550.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-18-all-fractions_k255_2869460_24
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25286..26704
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035FA7AA
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AKD05921.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
H3-18-all-fractions_k255_2869460_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(26779..27972)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037CDF90
Protein of unknown function DUF2911
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
H3-18-all-fractions_k255_2869460_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(28266..29729)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NGM0_9BACL
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
H3-18-all-fractions_k255_2869460_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


29937..32402
DNA (2466bp) protein (822aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Leucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q0_GEMAT
leucyl-tRNA synthetase class Ia
H3-18-all-fractions_k255_2869460_28
unknown

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32496..32681
DNA (186bp) protein (62aa)

This feature has no annotations

H3-18-all-fractions_k255_2869460_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

32824..33432
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C8EE7
protein of unknown function DUF937
Uncharacterized protein {ECO:0000313|EMBL:AHG87884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
H3-18-all-fractions_k255_2869460_30
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(33572..34195)
DNA (624bp) protein (208aa)
TspO/MBR family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TZR5_MYXSD
TspO/MBR family protein
TspO/MBR family protein {ECO:0000313|EMBL:AGC41996.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Displaying items 1-30 of 34 in total

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