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S1-16-all-fractions_k255_3659465

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_3659465_1
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(2..142)
DNA (141bp) protein (47aa)
tuf2; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu id=2964212 bin=GWF2_Lentisphaerae_57_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
S1-16-all-fractions_k255_3659465_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(156..2276)
DNA (2121bp) protein (707aa)
Elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFG_GEMAT
translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_3659465_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2756..3955)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHT5_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48043.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
S1-16-all-fractions_k255_3659465_4

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comp(3973..4773)
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN23446.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter id=14630881 bin=bin9_gal15 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
ABC transporter
S1-16-all-fractions_k255_3659465_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(4776..5843)
DNA (1068bp) protein (356aa)
ABC transporter, ATP binding subunit n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYH8_METCG
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S1-16-all-fractions_k255_3659465_6
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5840..6808)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484E56
HPr kinase
Uncharacterized protein {ECO:0000313|EMBL:ABW26935.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
S1-16-all-fractions_k255_3659465_7
unknown

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comp(6869..7057)
DNA (189bp) protein (63aa)

This feature has no annotations

S1-16-all-fractions_k255_3659465_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(7188..9155)
DNA (1968bp) protein (656aa)
Asparagine synthetase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6J9_9EURY
asparagine synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S1-16-all-fractions_k255_3659465_9
unknown

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comp(9152..9490)
DNA (339bp) protein (113aa)

This feature has no annotations

S1-16-all-fractions_k255_3659465_10
unknown

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comp(9549..9902)
DNA (354bp) protein (118aa)

This feature has no annotations

S1-16-all-fractions_k255_3659465_11
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10258..11601)
DNA (1344bp) protein (448aa)
TPR repeat-containing protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E7I9_GEOSM
TPR repeat-containing protein {ECO:0000313|EMBL:ACT19849.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
glycosyl transferase family protein
S1-16-all-fractions_k255_3659465_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11759..12229)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS7_GEMAT
ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S1-16-all-fractions_k255_3659465_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12226..12630)
DNA (405bp) protein (135aa)
30S ribosomal protein S12 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS12_GEMAT
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S1-16-all-fractions_k255_3659465_14
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12784..13617)
DNA (834bp) protein (278aa)
Uncharacterized protein n=4 Tax=Mycobacterium avium RepID=A0QHL3_MYCA1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EUA39378.1}; TaxID=1299330 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. avium 2285 (R).;"
S1-16-all-fractions_k255_3659465_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13887..18317)
DNA (4431bp) protein (1477aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT
DNA-directed RNA polymerase subunit beta
S1-16-all-fractions_k255_3659465_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18321..19865)
DNA (1545bp) protein (515aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT
DNA-directed RNA polymerase subunit beta
Displaying 16 items

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