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S3-18-all-fractions_k255_3348517

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3348517_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1..291
DNA (291bp) protein (97aa)
Electron transfer DM13
hypothetical protein id=14426683 bin=bin1_lowGC species=Bacillus sp. WBUNB004 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
S3-18-all-fractions_k255_3348517_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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377..1405
DNA (1029bp) protein (343aa)
Protein of unknown function DUF2260
Uncharacterized protein {ECO:0000313|EMBL:AHG89419.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1549..2217
DNA (669bp) protein (223aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89420.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2214..2459
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000374D48B
putative transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:AHG89421.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2456..3280)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMA4_9PLAN
pentapeptide repeat protein
Pentapeptide repeat protein {ECO:0000313|EMBL:AHG89422.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3550..4695
DNA (1146bp) protein (382aa)
Putative 3-carboxymuconate cyclase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICM6_BEII9
Lactonase, 7-bladed beta propeller
Lactonase, 7-bladed beta propeller {ECO:0000313|EMBL:AHG91424.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_7
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(4791..6050)
DNA (1260bp) protein (420aa)
Sigma-70, region 4 n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0F7J1_9LEPT
Sigma-70, region 4 {ECO:0000313|EMBL:EQA47065.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
sigma factor
S3-18-all-fractions_k255_3348517_8
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6047..6394)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TDL1_PARBH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADM08766.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
S3-18-all-fractions_k255_3348517_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6504..6974)
DNA (471bp) protein (157aa)
Putative transcriptional regulator n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8D3_ACIC5
transcriptional regulator
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
S3-18-all-fractions_k255_3348517_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7046..7480
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HML8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58008.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S3-18-all-fractions_k255_3348517_11
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7477..7941)
DNA (465bp) protein (155aa)
DoxX family protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2N4_SPHS2
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ADZ80713.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
S3-18-all-fractions_k255_3348517_12
Yersinia intermedia, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7960..8418)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Yersinia enterocolitica RepID=UPI00030A2047
Prolyl endopeptidase {ECO:0000313|EMBL:CRE36046.1}; TaxID=631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia intermedia.;"
putative prolyl endopeptidase
S3-18-all-fractions_k255_3348517_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8372..8902)
DNA (531bp) protein (177aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
Redoxin domain protein
Redoxin domain protein {ECO:0000313|EMBL:AHG89253.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8899..9591)
DNA (693bp) protein (231aa)
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AHG89254.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3348517_15
unknown

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9842..10333
DNA (492bp) protein (164aa)

This feature has no annotations

S3-18-all-fractions_k255_3348517_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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10584..11723
DNA (1140bp) protein (380aa)
putative 3-carboxymuconate cyclase id=24524035 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
3-carboxymuconate cyclase
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_3348517_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11770..13602
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y893_SORCE
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_3348517_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13623..14969
DNA (1347bp) protein (449aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHY4_ANADF
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_3348517_19
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14994..15536)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000364B7AB
Putative acetyltransferase {ECO:0000313|EMBL:EKO38435.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
hypothetical protein
S3-18-all-fractions_k255_3348517_20
unknown

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comp(15533..15823)
DNA (291bp) protein (97aa)
hypothetical protein
S3-18-all-fractions_k255_3348517_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(15820..16446)
DNA (627bp) protein (209aa)
RNA polymerase sigma factor RpoE n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L2G2_9ACTO
ECF subfamily RNA polymerase sigma-24
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_3348517_22
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16600..17403)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S465_9BURK
Probable transmembrane protein {ECO:0000313|EMBL:CDY75152.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
S3-18-all-fractions_k255_3348517_23
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17493..18713
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003646AEA
Malic enzyme
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG20758.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
S3-18-all-fractions_k255_3348517_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18723..19094
DNA (372bp) protein (124aa)
UPI0003D009E5 related cluster n=1 Tax=unknown RepID=UPI0003D009E5
Uncharacterized protein {ECO:0000313|EMBL:ESZ18458.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SMP-30/Gluconolaconase/LRE-like region family protein
Displaying 24 items

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