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S3-18-all-fractions_k255_3274440

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3274440_1
unknown

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comp(3..152)
DNA (150bp) protein (50aa)

This feature has no annotations

S3-18-all-fractions_k255_3274440_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(158..2947)
DNA (2790bp) protein (930aa)
hypothetical protein id=24475677 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_3274440_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3371..3781
DNA (411bp) protein (137aa)
30S ribosomal protein S12 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS12_GEMAT
rpsL; 30S ribosomal protein S12
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_3274440_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3778..4248
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS7_GEMAT
rpsG; 30S ribosomal protein S7
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_3274440_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4618..6714
DNA (2097bp) protein (699aa)
Elongation factor G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFG_GEMAT
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
fusA; elongation factor G
S3-18-all-fractions_k255_3274440_6
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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6799..7992
DNA (1194bp) protein (398aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Geobacter RepID=EFTU_GEOUR
Tax=GWC2_Nitrospirae_57_9_curated
S3-18-all-fractions_k255_3274440_7
R_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

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8217..8459
DNA (243bp) protein (81aa)
Protein translocase subunit SecE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N1_GEMAT
secE; preprotein translocase SecE subunit
Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_36_11_curated
S3-18-all-fractions_k255_3274440_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8463..9005
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N2_GEMAT
transcription termination/antitermination factor NusG
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_3274440_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9137..9562
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=10 Tax=Thermoanaerobacter RepID=RL11_THEP3
50S ribosomal protein L11
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_3274440_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9562..10251
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL1_GEMAT
ribosomal protein L1
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_3274440_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10248..10763
DNA (516bp) protein (172aa)
50S ribosomal protein L10
ribosomal protein L10 id=7201456 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_3274440_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10794..11192
DNA (399bp) protein (133aa)
50S ribosomal protein L7/L12 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N6_GEMAT
50S ribosomal protein L7/L12
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_3274440_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11390..15868
DNA (4479bp) protein (1493aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT
DNA-directed RNA polymerase subunit beta
S3-18-all-fractions_k255_3274440_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15879..20441
DNA (4563bp) protein (1521aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT
DNA-directed RNA polymerase subunit beta
S3-18-all-fractions_k255_3274440_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(20533..20937)
DNA (405bp) protein (135aa)
multidrug ABC transporter permease id=12555059 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 15 items

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