ggKbase home page

14_0929_12_30cm_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 115 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_12_30cm_scaffold_97_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..668)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G0_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(665..1102)
DNA (438bp) protein (146aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G1_GEMAT
putative biopolymer transport protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1102..1887)
DNA (786bp) protein (262aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G2_GEMAT
MotA/TolQ/ExbB proton channel
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1838..2827)
DNA (990bp) protein (330aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase id=4952052 bin=GWC2_Chloroflexi_73_18 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
14_0929_12_30cm_scaffold_97_5
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2824..4122)
DNA (1299bp) protein (433aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
Glutamyl-tRNA reductase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIY0_DESK7
glutamyl-tRNA reductase
14_0929_12_30cm_scaffold_97_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4119..4913)
DNA (795bp) protein (265aa)
Cytochrome c-type biogenesis protein CcsB id=4800841 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ResC/HemX-like cytochrome c biogenesis membrane protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4957..6243)
DNA (1287bp) protein (429aa)
LysM domain-containing protein id=7200269 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
conserved exported protein of unknown function, putative Peptidoglycan-binding LysM domain
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6215..6688)
DNA (474bp) protein (158aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6790..7182)
DNA (393bp) protein (131aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ADC6_9FIRM
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0929_12_30cm_scaffold_97_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7202..7633)
DNA (432bp) protein (144aa)
Inactive metal-dependent protease-like protein n=2 Tax=Idiomarina loihiensis RepID=Q5QWQ2_IDILO
peptidase M22
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7630..8043)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G9_GEMAT
putative protein family UPF0079, ATPase
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0929_12_30cm_scaffold_97_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8006..10012)
DNA (2007bp) protein (669aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
uvrB; UvrABC system protein B
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10024..12255)
DNA (2232bp) protein (744aa)
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
RelA/SpoT family protein
RelA/SpoT family protein {ECO:0000313|EMBL:AHG91100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0929_12_30cm_scaffold_97_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12252..12944)
DNA (693bp) protein (231aa)
DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H3_GEMAT
DNA repair protein RadC
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_15
unknown

Not on your lists

13113..13661
DNA (549bp) protein (183aa)

This feature has no annotations

14_0929_12_30cm_scaffold_97_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14164..15420
DNA (1257bp) protein (419aa)
PA-phosphatase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E9B87
phosphoesterase PA-phosphatase related protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AHG89265.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0929_12_30cm_scaffold_97_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15493..18789)
DNA (3297bp) protein (1099aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT
secA; preprotein translocase SecA subunit
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18797..19354)
DNA (558bp) protein (186aa)
nicotinate-nucleotide adenylyltransferase n=1 Tax=Thermus islandicus RepID=UPI0003B730A4
nicotinate-nucleotide adenylyltransferase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19375..20169)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I0_GEMAT
outer membrane assembly lipoprotein YfiO
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0929_12_30cm_scaffold_97_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20166..21062)
DNA (897bp) protein (299aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21059..21850)
DNA (792bp) protein (264aa)
TPR repeat-containing protein id=109566 bin=ACD73 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0929_12_30cm_scaffold_97_22
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21813..22799)
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase id=4503064 bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria rbh
UDP-glucuronate 5'-epimerase
Tax=GWC2_Deltaproteobacteria_65_14_curated
14_0929_12_30cm_scaffold_97_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22796..23749)
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ82_ROSS1
NAD-dependent epimerase/dehydratase
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0929_12_30cm_scaffold_97_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23734..25050)
DNA (1317bp) protein (439aa)
gur:Gura_2308 UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=48634 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
nucleotide sugar dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25047..26369)
DNA (1323bp) protein (441aa)
wecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase (EC:1.1.1.-)
Nucleotide-sugar dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I1_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0929_12_30cm_scaffold_97_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26366..27370)
DNA (1005bp) protein (335aa)
Oxidoreductase domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXC2_GRAMM id=5225809 bin=16ft_combo_ws3_JS1 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27367..28482)
DNA (1116bp) protein (372aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I2_GEMAT
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28479..29084)
DNA (606bp) protein (202aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZD3_DICTD
transferase hexapeptide repeat containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0929_12_30cm_scaffold_97_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29066..29827)
DNA (762bp) protein (254aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Brevibacillus laterosporus RepID=UPI00037C5CBD
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0929_12_30cm_scaffold_97_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(29998..32985)
DNA (2988bp) protein (996aa)
Carbamoyl-phosphate synthase large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CARB_GEMAT
Carbamoyl-phosphate synthase large subunit glutamine-dependent
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 115 in total

View Taxonomy