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S_2p5_S6_170907_scaffold_2486002

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_2p5_S6_170907_scaffold_2486002_1
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(280..1470)
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase bin=GWF2_OP3_43_52 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
acetylornithine/succinylornithine aminotransferase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_2
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(1467..2342)
DNA (876bp) protein (292aa)
Acetylglutamate kinase Tax=Sporomusa ovata DSM 2662 RepID=T0IUJ7_9FIRM
acetylglutamate kinase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(2323..3522)
DNA (1200bp) protein (400aa)
argJ; arginine biosynthesis bifunctional protein (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKU2_9BACT
Tax=RBG_16_Nitrospirae_64_22_curated
S_2p5_S6_170907_scaffold_2486002_4
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(3523..4557)
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9E0_AMMDK
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_5
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists


comp(4632..5021)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SQP3_9DELT
rpsI; ribosomal protein S9
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_6
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5018..5428)
DNA (411bp) protein (137aa)
50S ribosomal protein L13 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WKN0_EGGLE
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00012482}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
50S ribosomal protein L13
S_2p5_S6_170907_scaffold_2486002_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5457..7175)
DNA (1719bp) protein (573aa)
TPR domain protein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKP0_GEOSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY68744.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
S_2p5_S6_170907_scaffold_2486002_8
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

comp(7141..8268)
DNA (1128bp) protein (376aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI00036595A8
putative divalent heavy-metal cations transporter
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
S_2p5_S6_170907_scaffold_2486002_9

Not on your lists

comp(8265..9230)
DNA (966bp) protein (322aa)
Putative THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE TRANSMEMBRANE (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLS1_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48796.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thiamine biosynthesis lipoprotein TRANSMEMBRANE
S_2p5_S6_170907_scaffold_2486002_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9227..9760)
DNA (534bp) protein (178aa)
hypothetical protein bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
S_2p5_S6_170907_scaffold_2486002_11
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9760..10365)
DNA (606bp) protein (202aa)
Lipoprotein Tax=planctomycete KSU-1 RepID=I3IR40_9PLAN
Lipoprotein {ECO:0000313|EMBL:GAB64185.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
S_2p5_S6_170907_scaffold_2486002_12
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10362..10805)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IR41_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB64186.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
S_2p5_S6_170907_scaffold_2486002_13

Not on your lists

comp(10808..12211)
DNA (1404bp) protein (468aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IR95_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKM06884.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_2p5_S6_170907_scaffold_2486002_14
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12208..12435)
DNA (228bp) protein (76aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
S_2p5_S6_170907_scaffold_2486002_15
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(12437..13309)
DNA (873bp) protein (291aa)
Putative uncharacterized protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_16
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(13428..13961)
DNA (534bp) protein (178aa)
Ferric uptake regulator, Fur family bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
fur; ferric uptake regulation protein Fur
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_17
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(14166..15719)
DNA (1554bp) protein (518aa)
Sodium:neurotransmitter symporter family protein Tax=uncultured microorganism RepID=F8UHM0_9ZZZZ
SNF family Na+-dependent transporter
Tax=CG_Elusi_05
S_2p5_S6_170907_scaffold_2486002_18
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(15716..16468)
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A Tax=Nitrospina gracilis 3/211 RepID=M1Z1W5_9BACT
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_19
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(16444..17457)
DNA (1014bp) protein (338aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase bin=GWA2_OP3_53_43 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_20
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(17459..18535)
DNA (1077bp) protein (359aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9R2_AMMDK
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
S_2p5_S6_170907_scaffold_2486002_21
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

comp(18537..19346)
DNA (810bp) protein (270aa)
thiG; thiamine biosynthesis protein ThiG bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
thiG; thiamine biosynthesis protein ThiG
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
S_2p5_S6_170907_scaffold_2486002_22
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(19343..20560)
DNA (1218bp) protein (406aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
S_2p5_S6_170907_scaffold_2486002_23
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20589..21377)
DNA (789bp) protein (263aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3C1_9FIRM
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKP95778.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
S_2p5_S6_170907_scaffold_2486002_24
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21374..22375)
DNA (1002bp) protein (334aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM94_THEM7
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU51453.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Displaying 24 items

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