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B_1_S1_Biohub_coassembly_k141_101510

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_101510_1
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43..726)
DNA (684bp) protein (228aa)
Antioxidant, AhpC/TSA family protein {ECO:0000313|EMBL:AFC26923.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AFC26923.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
B_1_S1_Biohub_coassembly_k141_101510_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(803..2863)
DNA (2061bp) protein (687aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
B_1_S1_Biohub_coassembly_k141_101510_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

3303..3773
DNA (471bp) protein (157aa)
Putative RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:CDA81524.1}; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
B_1_S1_Biohub_coassembly_k141_101510_4
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

3770..6847
DNA (3078bp) protein (1026aa)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_101510_5
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

6866..8257
DNA (1392bp) protein (464aa)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_101510_6
unknown

Not on your lists

comp(8458..9708)
DNA (1251bp) protein (417aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_101510_7
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9720..11345)
DNA (1626bp) protein (542aa)
Tax=RBG_16_Elusimicrobia_66_12_curated
B_1_S1_Biohub_coassembly_k141_101510_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11576..12469
DNA (894bp) protein (298aa)
Tax=RBG_16_RIF_WS3X_71_46_curated
B_1_S1_Biohub_coassembly_k141_101510_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12634..13449)
DNA (816bp) protein (272aa)
Tax=CSP1_6_Rokubacteria
B_1_S1_Biohub_coassembly_k141_101510_10
unknown

Not on your lists

comp(13512..14633)
DNA (1122bp) protein (374aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_101510_11
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14756..17071
DNA (2316bp) protein (772aa)
TIGR03790 family protein {ECO:0000313|EMBL:EIQ02100.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
B_1_S1_Biohub_coassembly_k141_101510_12
unknown

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17068..17604
DNA (537bp) protein (179aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_101510_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17610..18320)
DNA (711bp) protein (237aa)
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19297.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
B_1_S1_Biohub_coassembly_k141_101510_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

18563..21517
DNA (2955bp) protein (985aa)
Tax=GWF2_Lentisphaerae_50_93_curated
B_1_S1_Biohub_coassembly_k141_101510_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

21604..23604
DNA (2001bp) protein (667aa)
Tax=GWF2_Lentisphaerae_50_93_curated
B_1_S1_Biohub_coassembly_k141_101510_16
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(23614..25080)
DNA (1467bp) protein (489aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
B_1_S1_Biohub_coassembly_k141_101510_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25700..26119)
DNA (420bp) protein (140aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
B_1_S1_Biohub_coassembly_k141_101510_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26109..26342)
DNA (234bp) protein (78aa)
CopG-like DNA-binding {ECO:0000313|EMBL:ABE37775.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
B_1_S1_Biohub_coassembly_k141_101510_19
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26541..27119)
DNA (579bp) protein (193aa)
Methyltransferase type 11 {ECO:0000313|EMBL:ABK16883.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
B_1_S1_Biohub_coassembly_k141_101510_20
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27847..28143)
DNA (297bp) protein (99aa)
Tax=RBG_16_Deltaproteobacteria_71_12_curated
B_1_S1_Biohub_coassembly_k141_101510_21
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(28154..28444)
DNA (291bp) protein (97aa)
Tax=GWA1_Bdellovibrionales_52_35_curated
B_1_S1_Biohub_coassembly_k141_101510_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28664..30703)
DNA (2040bp) protein (680aa)
Uncharacterized protein {ECO:0000313|EMBL:AGA27112.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_101510_23
unknown

Not on your lists

30903..31055
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 23 items

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