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B_1_S1_Biohub_coassembly_k141_712834

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_712834_1
uncultured Planctomycetales bacterium HF0500_02G17, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
DNA uptake protein and related DNA-binding proteins {ECO:0000313|EMBL:ADI22409.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured Planctomycetales bacterium HF0500_02G17.;"
B_1_S1_Biohub_coassembly_k141_712834_2
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

206..1507
DNA (1302bp) protein (434aa)
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_712834_3
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

1614..3359
DNA (1746bp) protein (582aa)
Tax=RBG_16_Chloroflexi_64_43_curated
B_1_S1_Biohub_coassembly_k141_712834_4
unknown

Not on your lists

3361..4080
DNA (720bp) protein (240aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_712834_5
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4090..5085)
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:GAC13705.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola lipolytica E3.;"
B_1_S1_Biohub_coassembly_k141_712834_6

Not on your lists

comp(5151..5531)
DNA (381bp) protein (127aa)
Marine sediment metagenome DNA, contig: S01H1_L06259 {ECO:0000313|EMBL:GAF73696.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_712834_7
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5635..7719
DNA (2085bp) protein (695aa)
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
B_1_S1_Biohub_coassembly_k141_712834_8
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7798..8727)
DNA (930bp) protein (310aa)
Tax=GWC2_Elusimicrobia_65_9_curated
B_1_S1_Biohub_coassembly_k141_712834_9
unknown

Not on your lists

comp(8737..9324)
DNA (588bp) protein (196aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_712834_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9327..9872)
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACL63611.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
B_1_S1_Biohub_coassembly_k141_712834_11
unknown

Not on your lists

10003..10821
DNA (819bp) protein (273aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_712834_12
unknown

Not on your lists

10906..11283
DNA (378bp) protein (126aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_712834_13
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11343..12539)
DNA (1197bp) protein (399aa)
Tax=GWC2_Deltaproteobacteria_65_14_curated
B_1_S1_Biohub_coassembly_k141_712834_14
unknown

Not on your lists

comp(12543..12890)
DNA (348bp) protein (116aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_712834_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13093..15792)
DNA (2700bp) protein (900aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
B_1_S1_Biohub_coassembly_k141_712834_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

16014..16838
DNA (825bp) protein (275aa)
Tax=CG_Omnitr_03
B_1_S1_Biohub_coassembly_k141_712834_17
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

16905..18029
DNA (1125bp) protein (375aa)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_712834_18
GWA1_OP11_39_21, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(18104..19012)
DNA (909bp) protein (303aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKR10654.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_39_21.;"
B_1_S1_Biohub_coassembly_k141_712834_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(19012..20028)
DNA (1017bp) protein (339aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
B_1_S1_Biohub_coassembly_k141_712834_20
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

comp(20127..21812)
DNA (1686bp) protein (562aa)
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
B_1_S1_Biohub_coassembly_k141_712834_21
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(21809..22432)
DNA (624bp) protein (208aa)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_712834_22
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(22444..22770)
DNA (327bp) protein (109aa)
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_712834_23
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(22817..24466)
DNA (1650bp) protein (550aa)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_712834_trna_3
unknown

Not on your lists

comp(24831..24921)
DNA (91bp)
transferRNA Ser
B_1_S1_Biohub_coassembly_k141_712834_trna_2
unknown

Not on your lists

comp(25123..25213)
DNA (91bp)
transferRNA Ser
B_1_S1_Biohub_coassembly_k141_712834_24
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(25335..25808)
DNA (474bp) protein (158aa)
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_712834_trna_1
unknown

Not on your lists

comp(25809..25882)
DNA (74bp)
transferRNA Arg
B_1_S1_Biohub_coassembly_k141_712834_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26069..29422
DNA (3354bp) protein (1118aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
B_1_S1_Biohub_coassembly_k141_712834_26
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

29419..30834
DNA (1416bp) protein (472aa)
Tax=RBG_13_RIF03_48_7_curated
B_1_S1_Biohub_coassembly_k141_712834_27
unknown

Not on your lists

comp(30917..31954)
DNA (1038bp) protein (346aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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