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B_1_S1_Biohub_coassembly_k141_917067

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_917067_1
unknown

Not on your lists

comp(1..186)
DNA (186bp) protein (62aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_2
unknown

Not on your lists

447..575
DNA (129bp) protein (43aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_3
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

854..1663
DNA (810bp) protein (270aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI00035E2CF0
hypothetical protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
B_1_S1_Biohub_coassembly_k141_917067_4
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1660..3225
DNA (1566bp) protein (522aa)
RHS repeat-associated core domain protein Tax=Salmonella enterica subsp. enterica serovar Cubana str. 76814 RepID=V7IQE7_SALET
RHS repeat-associated core domain protein {ECO:0000313|EMBL:ETA87506.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cubana str. 76814.;"
YD repeat protein
B_1_S1_Biohub_coassembly_k141_917067_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3203..3565
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y8H9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39168.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
B_1_S1_Biohub_coassembly_k141_917067_6
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3831..5006)
DNA (1176bp) protein (392aa)
Tax=RBG_13_Planctomycetes_63_9_curated
B_1_S1_Biohub_coassembly_k141_917067_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5404..8136)
DNA (2733bp) protein (911aa)
Serine/threonine-protein kinase bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
B_1_S1_Biohub_coassembly_k141_917067_8
unknown

Not on your lists

8322..9473
DNA (1152bp) protein (384aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_9
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

9584..10645
DNA (1062bp) protein (354aa)
Endoglucanase-related protein bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
B_1_S1_Biohub_coassembly_k141_917067_10
unknown

Not on your lists

10746..11711
DNA (966bp) protein (322aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_11
unknown

Not on your lists

comp(11713..11886)
DNA (174bp) protein (58aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_12
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12073..14202
DNA (2130bp) protein (710aa)
RNA polymerase subunit sigma-24 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4EE98
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:ELP69188.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
RNA polymerase sigma factor SigK
B_1_S1_Biohub_coassembly_k141_917067_13
RLO_OD1_Nomurabacteria_44_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14264..14404
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_44_11_curated
B_1_S1_Biohub_coassembly_k141_917067_14
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14492..16195)
DNA (1704bp) protein (568aa)
Putative uncharacterized protein bin=GWB2_Elusimicrobia_63_16 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
hypothetical protein
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
B_1_S1_Biohub_coassembly_k141_917067_15

Not on your lists

16436..17923
DNA (1488bp) protein (496aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYP8_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:KKM23414.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HEAT repeat-containing PBS lyase
B_1_S1_Biohub_coassembly_k141_917067_16
unknown

Not on your lists

17931..18839
DNA (909bp) protein (303aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_17
unknown

Not on your lists

comp(18907..19167)
DNA (261bp) protein (87aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19173..19613
DNA (441bp) protein (147aa)
phosphoribosylglycinamide formyltransferase Tax=Frankia sp. Iso899 RepID=UPI0003B48C95
Uncharacterized protein {ECO:0000313|EMBL:EHN10186.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_917067_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19624..20775
DNA (1152bp) protein (384aa)
Putative transporter/hydrolase Tax=bacterium symbiont of Theonella swinhoei pTSMAC1 RepID=J9ZW26_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX03696.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
beta-lactamase
B_1_S1_Biohub_coassembly_k141_917067_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20941..22701
DNA (1761bp) protein (587aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
B_1_S1_Biohub_coassembly_k141_917067_21
unknown

Not on your lists

22825..23331
DNA (507bp) protein (169aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23442..23795
DNA (354bp) protein (118aa)
Dual specificity protein phosphatase Tax=Pedosphaera parvula Ellin514 RepID=B9XII8_9BACT
Dual specificity protein phosphatase {ECO:0000313|EMBL:EEF60449.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dual specificity protein phosphatase
B_1_S1_Biohub_coassembly_k141_917067_23
unknown

Not on your lists

23853..24437
DNA (585bp) protein (195aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_917067_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

24652..25056
DNA (405bp) protein (135aa)
Putative integral membrane protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0C5_9BACT
Putative integral membrane protein {ECO:0000313|EMBL:EDY20439.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_917067_25
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25167..25634
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QD82_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX59304.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_917067_26
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25642..25845)
DNA (204bp) protein (68aa)
Uncharacterized protein family (UPF0150) Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y9T9_THIV6
hypothetical protein
Uncharacterized protein family (UPF0150) {ECO:0000313|EMBL:AFL73757.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
B_1_S1_Biohub_coassembly_k141_917067_27
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25882..26574)
DNA (693bp) protein (231aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA300-N18 RepID=UPI000382BBA0
peptidase membrane zinc metallopeptidase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_917067_28
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(26769..28520)
DNA (1752bp) protein (584aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8W5_PIRSD
4Fe-4S ferredoxin
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_917067_29
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(28520..29602)
DNA (1083bp) protein (361aa)
FMN-binding domain protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8W6_PIRSD
FMN-binding domain-containing protein
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_917067_30
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(29599..30576)
DNA (978bp) protein (326aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000349CA52
ApbE family {ECO:0000313|EMBL:EDY80481.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
ApbE family lipoprotein
Displaying items 1-30 of 33 in total

View Taxonomy