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B_1_S1_Biohub_coassembly_k141_1729366

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1729366_1
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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861..1304
DNA (444bp) protein (148aa)
Acetoin dehydrogenase AcuB Tax=Thermus sp. RL RepID=H7GF87_9DEIN
Acetoin dehydrogenase {ECO:0000313|EMBL:KGQ21857.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
acuB; acetoin utilization acuB protein
B_1_S1_Biohub_coassembly_k141_1729366_2
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

1376..1954
DNA (579bp) protein (193aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000361D1FC
hypothetical protein
Tax=Caldatribacterium californiense
B_1_S1_Biohub_coassembly_k141_1729366_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1947..3341)
DNA (1395bp) protein (465aa)
NADH:flavin oxidoreductase Tax=Magnetospirillum sp. SO-1 RepID=M2Z4K1_9PROT
NADH:flavin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
B_1_S1_Biohub_coassembly_k141_1729366_4
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(3408..4082)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L5K3_9BACT
putative nickel/cobalt efflux system RcnA
Tax=RBG_16_Zixibacteria_40_9_curated
B_1_S1_Biohub_coassembly_k141_1729366_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4109..5221)
DNA (1113bp) protein (371aa)
Acyl-CoA dehydrogenases bin=GWD2_Deltaproteobacteria_55_8 species=uncultured nuHF2 cluster bacterium HF0500_39O04 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acyl-CoA dehydrogenase
Tax=GWD2_Deltaproteobacteria_55_8_curated
B_1_S1_Biohub_coassembly_k141_1729366_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5312..6100)
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase Tax=Sorangium cellulosum So0157-2 RepID=S4XKA1_SORCE
Enoyl-CoA hydratase {ECO:0000313|EMBL:EYF00334.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
enoyl-CoA hydratase
B_1_S1_Biohub_coassembly_k141_1729366_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6111..6515)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI0003743A78
Bona fide RidA/YjgF/TdcF/RutC subgroup {ECO:0000313|EMBL:AKF07328.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
endoribonuclease L-PSP
B_1_S1_Biohub_coassembly_k141_1729366_8
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6776..7477)
DNA (702bp) protein (234aa)
beta-lactamase Tax=Burkholderia sp. JPY251 RepID=UPI0003628F54
NUDIX domain protein {ECO:0000313|EMBL:KJF18923.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
nudix hydrolase
B_1_S1_Biohub_coassembly_k141_1729366_9
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7482..7877)
DNA (396bp) protein (132aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW22_RUBGI
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=CG_Delta_07
B_1_S1_Biohub_coassembly_k141_1729366_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7871..8647)
DNA (777bp) protein (259aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003731DF9
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KFX28666.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
short-chain dehydrogenase/reductase SDR
B_1_S1_Biohub_coassembly_k141_1729366_11
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8717..9466)
DNA (750bp) protein (250aa)
Creatininase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVM0_HALO1
creatininase
Creatininase {ECO:0000313|EMBL:ACY17581.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_1729366_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9767..11311)
DNA (1545bp) protein (515aa)
acyl-CoA synthetase (EC:6.2.1.-)
Acyl-CoA synthetase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQG4_SORC5
Benzoate-CoA ligase {ECO:0000313|EMBL:AKF09530.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
B_1_S1_Biohub_coassembly_k141_1729366_13
unknown

Not on your lists

comp(11416..12018)
DNA (603bp) protein (201aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1729366_14
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12035..12475)
DNA (441bp) protein (147aa)
Putative 4-hydroxybenzoyl CoA thioesterase Tax=Plesiocystis pacifica SIR-1 RepID=A6GIQ4_9DELT
thioesterase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
B_1_S1_Biohub_coassembly_k141_1729366_15
unknown

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12720..13742
DNA (1023bp) protein (341aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1729366_16
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(13804..17001)
DNA (3198bp) protein (1066aa)
protease Tax=Gemmata obscuriglobus RepID=UPI00016C40C1
peptidase S41
Tax=RBG_13_RIF03_48_7_curated
B_1_S1_Biohub_coassembly_k141_1729366_17
unknown

Not on your lists

17094..17303
DNA (210bp) protein (70aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1729366_18
unknown

Not on your lists

17365..17655
DNA (291bp) protein (97aa)
AfsR family transcriptional regulator Tax=Streptomyces acidiscabies RepID=UPI000287EB98
B_1_S1_Biohub_coassembly_k141_1729366_19
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17655..19088
DNA (1434bp) protein (478aa)
Uncharacterized protein Tax=Microcystis sp. T1-4 RepID=I4IAG1_9CHRO
photosystem I assembly protein Ycf3
Photosystem I assembly protein Ycf3 {ECO:0000313|EMBL:AKB53660.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
B_1_S1_Biohub_coassembly_k141_1729366_20
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19085..20614
DNA (1530bp) protein (510aa)
Uncharacterized protein Tax=Oscillatoria acuminata PCC 6304 RepID=K9TSP8_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY85206.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
B_1_S1_Biohub_coassembly_k141_1729366_21
unknown

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20793..21863
DNA (1071bp) protein (357aa)

This feature has no annotations

Displaying 21 items

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