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B_1_S1_Biohub_coassembly_k141_1706154

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_1706154_1
unknown

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155..760
DNA (606bp) protein (202aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_2
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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770..1945
DNA (1176bp) protein (392aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
DNA-directed DNA polymerase (EC:2.7.7.7)
Tax=RBG_16_Planctomycetes_64_10_curated
B_1_S1_Biohub_coassembly_k141_1706154_3
unknown

Not on your lists

2002..2781
DNA (780bp) protein (260aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_4
unknown

Not on your lists

comp(2891..3703)
DNA (813bp) protein (271aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3700..4404)
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XS61_SORCE
Molybdenum cofactor biosynthesis protein MoaA {ECO:0000313|EMBL:AKF07020.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_1706154_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4661..6040)
DNA (1380bp) protein (460aa)
Coenzyme F390 synthetase Tax=Thiorhodovibrio sp. 970 RepID=H8Z4T8_9GAMM
Coenzyme F390 synthetase {ECO:0000313|EMBL:AKF07019.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
capsular polysaccharide biosynthesis protein CapK
B_1_S1_Biohub_coassembly_k141_1706154_7
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6037..6621)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Thiorhodovibrio sp. 970 RepID=H8Z4T7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIC20344.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_1706154_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6720..7292
DNA (573bp) protein (191aa)
RNA polymerase sigma factor Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I6M5_AZOC5
RNA polymerase
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
B_1_S1_Biohub_coassembly_k141_1706154_9
unknown

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7316..8179
DNA (864bp) protein (288aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_10
unknown

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8182..9024
DNA (843bp) protein (281aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_11
CG_Arma_01, Armatimonadetes, Bacteria

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9094..11235
DNA (2142bp) protein (714aa)
hypothetical protein; K07114 uncharacterized protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_1706154_12
unknown

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comp(11299..11901)
DNA (603bp) protein (201aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_13
unknown

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comp(11917..12102)
DNA (186bp) protein (62aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_14
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12148..13008
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7I1_CHLAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL26016.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
B_1_S1_Biohub_coassembly_k141_1706154_15
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13030..15264)
DNA (2235bp) protein (745aa)
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] Tax=Escherichia coli 4_1_47FAA RepID=H1C4I8_ECOLX
Alpha,alpha-trehalose-phosphate synthase {ECO:0000313|EMBL:AKF08771.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
OtsA trehalose-6-phosphate synthase
B_1_S1_Biohub_coassembly_k141_1706154_16
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15251..16879)
DNA (1629bp) protein (543aa)
trehalose synthase (EC:5.4.99.16)
Trehalose synthase {ECO:0000313|EMBL:ADV62630.1}; EC=5.4.99.16 {ECO:0000313|EMBL:ADV62630.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
trehalose synthase Tax=Meiothermus timidus RepID=UPI000379ED0B
B_1_S1_Biohub_coassembly_k141_1706154_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(16988..17998)
DNA (1011bp) protein (337aa)
Cation antiporter (Na+/Ca2+) Tax=Blastopirellula marina DSM 3645 RepID=A4A287_9PLAN
putative sodium/calcium antiporter
Tax=RBG_16_Chloroflexi_56_8_curated
B_1_S1_Biohub_coassembly_k141_1706154_18

Not on your lists

18179..19249
DNA (1071bp) protein (357aa)
Prenyltransferase-like Tax=Chthonomonas calidirosea T49 RepID=S0ET14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKM24456.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Prenyltransferase-like
B_1_S1_Biohub_coassembly_k141_1706154_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19313..21394
DNA (2082bp) protein (694aa)
RNA polymerase sigma-H factor Tax=Gemmata obscuriglobus RepID=UPI00016C4345
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28116.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_1706154_20
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21567..24455)
DNA (2889bp) protein (963aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain IMS101).;"
glycine dehydrogenase (EC:1.4.4.2)
glycine dehydrogenase Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003479E39
B_1_S1_Biohub_coassembly_k141_1706154_21
unknown

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24813..26192
DNA (1380bp) protein (460aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_1706154_22
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26250..26642
DNA (393bp) protein (131aa)
Putative uncharacterized protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WAB9_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL24915.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
DnaJ domain-containing protein
B_1_S1_Biohub_coassembly_k141_1706154_23
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26654..27553
DNA (900bp) protein (300aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RF18_CLAMS
Tax=RBG_16_Deltaproteobacteria_71_12_curated
B_1_S1_Biohub_coassembly_k141_1706154_24
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27483..28226)
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Streptomyces sp. HPH0547 RepID=S3AYA3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFZ32104.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
B_1_S1_Biohub_coassembly_k141_1706154_25
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

28458..28955
DNA (498bp) protein (166aa)
CBS protein Tax=uncultured bacterium RepID=K1YFJ3_9BACT
CBS domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
B_1_S1_Biohub_coassembly_k141_1706154_26
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

29095..30234
DNA (1140bp) protein (380aa)
Efflux transporter, RND family, MFP subunit Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0R8_NITHN
RND family efflux transporter MFP subunit
Tax=CG_CP02_01
B_1_S1_Biohub_coassembly_k141_1706154_27
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

30231..30929
DNA (699bp) protein (233aa)
ABC transporter related protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2T6_ISOPI
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADV63583.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
B_1_S1_Biohub_coassembly_k141_1706154_28
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30926..32134
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Thauera sp. 63 RepID=N6WZ48_9RHOO
ABC transporter permease protein {ECO:0000313|EMBL:KGE04641.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
putative ABC transporter protein
B_1_S1_Biohub_coassembly_k141_1706154_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

32134..33336
DNA (1203bp) protein (401aa)
antimicrobial peptide ABC transporter permease bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
B_1_S1_Biohub_coassembly_k141_1706154_30
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

33379..34506
DNA (1128bp) protein (376aa)
Tax=RBG_16_Planctomycetes_41_13_curated
Displaying 30 items

View Taxonomy