name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
B_1_S1_Biohub_coassembly_k141_1932788_1
RLO_PLX_64_10, Bacteria
|
Not on your lists |
comp(331..1032)
|
alias=16ft_combo_ws3_scaffold_11273_17 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_2
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1268..2962)
|
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASK8_PELPD
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABL00329.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
|
|
B_1_S1_Biohub_coassembly_k141_1932788_trna_1
unknown
|
Not on your lists |
3258..3331
|
transferRNA Arg
|
|
B_1_S1_Biohub_coassembly_k141_1932788_3
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(3426..3869)
|
Putative uncharacterized protein Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CIE7_SHEPW
hypothetical protein
Tax=RBG_13_Bacteroidetes_46_8_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3880..5385)
|
Uncharacterized protein Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SJA2_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB50170.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
|
|
B_1_S1_Biohub_coassembly_k141_1932788_5
RLO_PLX_64_10, Bacteria
|
Not on your lists |
comp(5597..6823)
|
UvrABC system protein C Tax=Marinobacter nanhaiticus D15-8W RepID=N6WZE8_9ALTE
DNA polymerase III subunit epsilon
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea
|
Not on your lists |
comp(6820..7215)
|
hypothetical protein Tax=Dyella japonica RepID=UPI00031E99C9
thioesterase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_7
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea
|
Not on your lists |
comp(7212..7841)
|
Uncharacterized protein Tax=Haloferax prahovense DSM 18310 RepID=M0GPP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ72849.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
hypothetical protein
|
|
B_1_S1_Biohub_coassembly_k141_1932788_8
unknown
|
Not on your lists |
comp(7891..8166)
|
This feature has no annotations |
|
B_1_S1_Biohub_coassembly_k141_1932788_9
unknown
|
Not on your lists |
comp(8398..8595)
|
This feature has no annotations |
|
B_1_S1_Biohub_coassembly_k141_1932788_10
unknown
|
Not on your lists |
comp(8579..9118)
|
This feature has no annotations |
|
B_1_S1_Biohub_coassembly_k141_1932788_11
unknown
|
Not on your lists |
comp(9134..9493)
|
WD-40 repeat Tax=Gemmata obscuriglobus RepID=UPI00016C52BB
|
|
B_1_S1_Biohub_coassembly_k141_1932788_12
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9762..11486
|
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0I9_THEOJ
Tax=GWA2_Deltaproteobacteria_55_10_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria
|
Not on your lists |
11558..13546
|
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type domain protein bin=GWA2_Elusimicrobia_69_24 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
peptidyl-prolyl cis-trans isomerase
Tax=GWA2_Elusimicrobia_69_24_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_14
RBG_16_RIF03_38_10_curated, RIF03, Bacteria
|
Not on your lists |
comp(13701..14795)
|
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5M4_ISOPI
Tax=RBG_16_RIF03_38_10_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_15
RLO_PLX_64_10, Bacteria
|
Not on your lists |
14972..17896
|
Phosphoribosylformylglycinamidine synthase 2 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLN0_SINAD
phosphoribosylformylglycinamidine synthase II
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_16
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria
|
Not on your lists |
18077..19084
|
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHE3_THEYD
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_17
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19096..20190
|
Tetratricopeptide TPR_2 repeat protein Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K9Z0_CYAP7
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_18
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20199..20429
|
Uncharacterized protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=J9UJL9_PELCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR67605.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
|
|
B_1_S1_Biohub_coassembly_k141_1932788_19
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria
|
Not on your lists |
20426..21175
|
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_20
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria
|
Not on your lists |
21176..21763
|
Colicin V production protein Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACF2_THEID
Colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:AEH44653.1}; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
|
|
B_1_S1_Biohub_coassembly_k141_1932788_21 |
Not on your lists |
21760..22923
|
Glycosyl transferase group 1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZJ8_ISOPI
Uncharacterized protein {ECO:0000313|EMBL:KKN84890.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
group 1 glycosyl transferase
|
|
B_1_S1_Biohub_coassembly_k141_1932788_22
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria
|
Not on your lists |
23012..23791
|
Probable phosphoesterase Tax=Blastopirellula marina DSM 3645 RepID=A4A071_9PLAN
metallophosphoesterase
Tax=RBG_16_Planctomycetes_43_13_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_23
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria
|
Not on your lists |
23885..24253
|
ribosome hibernation promoting factor HPF Tax=Pseudomonas stutzeri RepID=UPI0002DD0D6F
ribosome hibernation promoting factor HPF
Tax=RBG_16_Planctomycetes_43_13_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_24
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria
|
Not on your lists |
24363..24836
|
Putative PTS system component bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Tax=RBG_16_Planctomycetes_43_13_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_25
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria
|
Not on your lists |
24848..25114
|
ptsH; Phosphocarrier protein HPr (EC:2.7.11.-)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI0003088875
Tax=RBG_16_Planctomycetes_43_13_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_26
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria
|
Not on your lists |
25169..26911
|
Phosphoenolpyruvate-protein phosphotransferase Tax=uncultured planctomycete RepID=H5SC03_9BACT
phosphoenolpyruvate-protein phosphotransferase
Tax=GWF2_Planctomycetes_40_8_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_27
unknown
|
Not on your lists |
26953..28314
|
This feature has no annotations |
|
B_1_S1_Biohub_coassembly_k141_1932788_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria
|
Not on your lists |
28334..31858
|
adenylate/guanylate cyclase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
guanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
|
|
B_1_S1_Biohub_coassembly_k141_1932788_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
|
Not on your lists |
31939..33507
|
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037BCA02
HD-GYP domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
|