ggKbase home page

B_1_S1_Biohub_coassembly_k141_2669603

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2669603_1
unknown

Not on your lists

1..690
DNA (690bp) protein (230aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_2
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

697..2439
DNA (1743bp) protein (581aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP89_KORVE
serine/threonin protein kinase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
B_1_S1_Biohub_coassembly_k141_2669603_3
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2631..5678)
DNA (3048bp) protein (1016aa)
Acriflavin resistance protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XX85_9BACT
acriflavin resistance protein
Tax=CG_Delta_07
B_1_S1_Biohub_coassembly_k141_2669603_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5675..9031)
DNA (3357bp) protein (1119aa)
Acriflavin resistance protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKL7_HALO1
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACY15065.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_2669603_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9165..10235)
DNA (1071bp) protein (357aa)
hemolysin D Tax=Arenimonas oryziterrae RepID=UPI0003B78A6A
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
B_1_S1_Biohub_coassembly_k141_2669603_6
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(10271..12031)
DNA (1761bp) protein (587aa)
Putative peptidase M1, membrane alanine aminopeptidase bin=GWC2_Nitrospirae_57_13 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWB2_Nitrospirae_47_37_curated
B_1_S1_Biohub_coassembly_k141_2669603_7
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12048..12449)
DNA (402bp) protein (134aa)
Tax=GWA2_Deltaproteobacteria_54_12_curated
B_1_S1_Biohub_coassembly_k141_2669603_8
unknown

Not on your lists

comp(12446..12832)
DNA (387bp) protein (129aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_9
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(12872..13441)
DNA (570bp) protein (190aa)
RNA polymerase sigma-24 subunit ECF subfamily Tax=Akkermansia sp. CAG:344 RepID=R7DZG7_9BACT
ECF subfamily RNA polymerase sigma-24 factor
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_2669603_10
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13510..13788
DNA (279bp) protein (93aa)
GIY-YIG catalytic domain protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TRM7_9DELT
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:ERK88039.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
GIY-YIG catalytic domain-containing protein
B_1_S1_Biohub_coassembly_k141_2669603_11
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13952..14890)
DNA (939bp) protein (313aa)
Permease of the drug/metabolite transporter (DMT) superfamily Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSC6_9CLOT
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
B_1_S1_Biohub_coassembly_k141_2669603_12
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14887..15483)
DNA (597bp) protein (199aa)
Putative adenylate/guanylate cyclase Tax=Leptonema illini DSM 21528 RepID=H2CKY0_9LEPT
adenylate/guanylate cyclase
Tax=RBG_16_Deltaproteobacteria_71_12_curated
B_1_S1_Biohub_coassembly_k141_2669603_13
unknown

Not on your lists

comp(15491..15715)
DNA (225bp) protein (75aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_14
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15913..17253)
DNA (1341bp) protein (447aa)
Putative AP superfamily protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKG9_SINAD
AP superfamily protein
Tax=CG_Delta_03
B_1_S1_Biohub_coassembly_k141_2669603_trna_1
unknown

Not on your lists

17317..17402
DNA (86bp)
transferRNA Leu
B_1_S1_Biohub_coassembly_k141_2669603_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17400..21056)
DNA (3657bp) protein (1219aa)
Adenylate cyclase Tax=Cystobacter fuscus DSM 2262 RepID=S9QUL5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA89742.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
adenylate/guanylate cyclase
B_1_S1_Biohub_coassembly_k141_2669603_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21163..22464
DNA (1302bp) protein (434aa)
Putative phospholipase/carboxylesterase Tax=planctomycete KSU-1 RepID=I3IJT8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAN34893.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
phospholipase/carboxylesterase
B_1_S1_Biohub_coassembly_k141_2669603_17
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22687..23907
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG0_NIAKG
major facilitator superfamily protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
B_1_S1_Biohub_coassembly_k141_2669603_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23921..24427
DNA (507bp) protein (169aa)
protease Do (EC:3.4.21.108)
Protease Do {ECO:0000313|EMBL:ADV01335.1}; EC=3.4.21.108 {ECO:0000313|EMBL:ADV01335.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Protease Do Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFY3_ALIDK
B_1_S1_Biohub_coassembly_k141_2669603_19
unknown

Not on your lists

24488..24679
DNA (192bp) protein (64aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_20
unknown

Not on your lists

24676..24792
DNA (117bp) protein (39aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_21
unknown

Not on your lists

24850..25098
DNA (249bp) protein (83aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_22
unknown

Not on your lists

25114..25344
DNA (231bp) protein (77aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_23
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

25431..26351
DNA (921bp) protein (307aa)
Putative uncharacterized protein bin=GWB1_Deltaproteobacteria_rel_55_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
B_1_S1_Biohub_coassembly_k141_2669603_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26533..26952
DNA (420bp) protein (140aa)
Histidine triad (HIT) family hydrolase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q39ZZ9_PELCD
histidine triad (HIT) family hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
B_1_S1_Biohub_coassembly_k141_2669603_25
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

26965..27771
DNA (807bp) protein (269aa)
Serine/threonine protein kinase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG30_SINAD
serine/threonine protein kinase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
B_1_S1_Biohub_coassembly_k141_2669603_26
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28049..29527
DNA (1479bp) protein (493aa)
K+ transport system, NAD-binding component Tax=Moorea producens 3L RepID=F4XI06_9CYAN
K+ transport system, NAD-binding component {ECO:0000313|EMBL:EGJ35712.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
potassium voltage-gated channel
B_1_S1_Biohub_coassembly_k141_2669603_27
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29647..31203
DNA (1557bp) protein (519aa)
Aminoglycoside phosphotransferase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGY8_HALO1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACY14710.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_2669603_28
unknown

Not on your lists

31884..34283
DNA (2400bp) protein (800aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2669603_29
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34420..35361
DNA (942bp) protein (314aa)
Methyltransferase FkbM family Tax=Frankia sp. (strain EAN1pec) RepID=A8L018_FRASN
Uncharacterized protein {ECO:0000313|EMBL:KDN75074.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
FkbM family methyltransferase
Displaying items 1-30 of 35 in total

View Taxonomy