ggKbase home page

B_1_S1_Biohub_coassembly_k141_2849031

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2849031_1
unknown

Not on your lists

296..2260
DNA (1965bp) protein (655aa)
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2849031_2

Not on your lists

comp(2366..3592)
DNA (1227bp) protein (409aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Natrinema gari JCM 14663 RepID=L9YT27_9EURY
HEAT repeat-containing PBS lyase
Marine sediment metagenome DNA, contig: S01H1_S41552 {ECO:0000313|EMBL:GAG42399.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2849031_3
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3632..4183)
DNA (552bp) protein (184aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002E5F207
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADV60786.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
B_1_S1_Biohub_coassembly_k141_2849031_4
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4331..4915
DNA (585bp) protein (195aa)
NUDIX hydrolase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBH2_AMMDK
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACX51599.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
B_1_S1_Biohub_coassembly_k141_2849031_5
unknown

Not on your lists

4968..5177
DNA (210bp) protein (70aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5142..7988)
DNA (2847bp) protein (949aa)
Tetratricopeptide repeat protein,protein kinase family protein Tax=Singulisphaera acidiphila RepID=L0DIH9_SINAD
tetratricopeptide repeat protein,protein kinase family protein
Tetratricopeptide repeat protein,protein kinase family protein {ECO:0000313|EMBL:AGA28623.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_2849031_7
unknown

Not on your lists

comp(8033..9784)
DNA (1752bp) protein (584aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

10014..11249
DNA (1236bp) protein (412aa)
Proteinase inhibitor I4 serpin bin=GWB2_Desulfobacterales_56_26 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_2849031_9
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(11323..11934)
DNA (612bp) protein (204aa)
methyltransferase Tax=Laceyella sacchari RepID=UPI0003B5CBC9
putative methyltransferase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
B_1_S1_Biohub_coassembly_k141_2849031_10
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11946..12740)
DNA (795bp) protein (265aa)
Cyclopropane-fatty-acyl-phospholipid synthase family protein Tax=Planctomyces maris DSM 8797 RepID=A6C2B6_9PLAN
Cyclopropane-fatty-acyl-phospholipid synthase family protein {ECO:0000313|EMBL:EDL61208.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
methyltransferase type 11
B_1_S1_Biohub_coassembly_k141_2849031_11
unknown

Not on your lists

comp(12824..13798)
DNA (975bp) protein (325aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_12
unknown

Not on your lists

13884..14342
DNA (459bp) protein (153aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_13
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14427..14696
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Rhizobium meliloti RepID=F6BMR5_SINMB
Uncharacterized protein {ECO:0000313|EMBL:KHG42851.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2849031_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14689..15204
DNA (516bp) protein (172aa)
Acetyltransferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQK8_SINAD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGA31210.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_2849031_15
unknown

Not on your lists

comp(15522..15719)
DNA (198bp) protein (66aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_16
unknown

Not on your lists

comp(15965..16744)
DNA (780bp) protein (260aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_17
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16757..17212)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TUV3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY86632.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
B_1_S1_Biohub_coassembly_k141_2849031_18
unknown

Not on your lists

comp(17218..17565)
DNA (348bp) protein (116aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2849031_19
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17562..18314)
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Chthonomonas calidirosea T49 RepID=S0EU91_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
B_1_S1_Biohub_coassembly_k141_2849031_20
GWA1_OP11_41_61, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

18595..20112
DNA (1518bp) protein (506aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS14630.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_41_61.;"
coiled-coil 226..247 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
B_1_S1_Biohub_coassembly_k141_2849031_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

20235..21758
DNA (1524bp) protein (508aa)
id=4545271 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RBG_13_Acidobacteria_68_16_curated
B_1_S1_Biohub_coassembly_k141_2849031_22
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21766..22890)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029A43A1
Uncharacterized protein {ECO:0000313|EMBL:KFA90070.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
B_1_S1_Biohub_coassembly_k141_2849031_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23081..23431
DNA (351bp) protein (117aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
B_1_S1_Biohub_coassembly_k141_2849031_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23442..24065
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0IUF2_MYCSM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
B_1_S1_Biohub_coassembly_k141_2849031_25
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

24400..25800
DNA (1401bp) protein (467aa)
Membrane translocator Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8H3N6_DEIGI
Membrane translocator
Membrane translocator {ECO:0000313|EMBL:AFD28133.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
B_1_S1_Biohub_coassembly_k141_2849031_26
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(25923..26735)
DNA (813bp) protein (271aa)
lysM; putative methyltransferase
SAM-dependent methyltransferase, putative bin=GWF2_OP3_43_52 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
B_1_S1_Biohub_coassembly_k141_2849031_27
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26865..29078
DNA (2214bp) protein (738aa)
Zn-dependent protease with chaperone function Tax=Planctomyces maris DSM 8797 RepID=A6CDH1_9PLAN
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:EDL57285.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Zn-dependent protease with chaperone function
B_1_S1_Biohub_coassembly_k141_2849031_28
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29277..31211
DNA (1935bp) protein (645aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003677B49
Tax=RBG_16_Gallionellales_57_15_curated
B_1_S1_Biohub_coassembly_k141_2849031_29
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

31330..32187
DNA (858bp) protein (286aa)
ABC transporter related Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYW5_RUBXD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABG03413.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
B_1_S1_Biohub_coassembly_k141_2849031_30
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

32184..32933
DNA (750bp) protein (250aa)
ABC-2 type transporter Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYW6_RUBXD
ABC transporter
Tax=BJP_IG2158_Anaerolineales_38_74
Displaying items 1-30 of 35 in total

View Taxonomy