ggKbase home page

B_1_S1_Biohub_coassembly_k141_2947697

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2947697_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212..541)
DNA (330bp) protein (110aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PKM9_DESSD
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AGF77026.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
B_1_S1_Biohub_coassembly_k141_2947697_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628..1638
DNA (1011bp) protein (337aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein bin=bin3_NC10 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
B_1_S1_Biohub_coassembly_k141_2947697_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

1650..5039
DNA (3390bp) protein (1130aa)
Adenylyl cyclase class-3/4/guanylyl cyclase bin=GWC2_Chloroflexi_73_18 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
adenylate cyclase
Tax=RBG_16_Armatimonadetes_67_12_curated
B_1_S1_Biohub_coassembly_k141_2947697_4
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

5118..6512
DNA (1395bp) protein (465aa)
Fumarase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYJ9_ROSS1
fumarate lyase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
B_1_S1_Biohub_coassembly_k141_2947697_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6505..7926
DNA (1422bp) protein (474aa)
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] bin=bin3_NC10 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
succinate-semialdehyde dehydrogenase
Tax=CSP1_5_NC10
B_1_S1_Biohub_coassembly_k141_2947697_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

8056..8712
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54409.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Edwardsiella tarda genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
isoprenylcysteine carboxyl methyltransferase
B_1_S1_Biohub_coassembly_k141_2947697_7
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8731..9669
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus W.;"
Thioredoxin reductase Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9M4_ANAD2
thioredoxin reductase
B_1_S1_Biohub_coassembly_k141_2947697_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9673..10095)
DNA (423bp) protein (141aa)
hypothetical protein
Hypothetical membrane protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
B_1_S1_Biohub_coassembly_k141_2947697_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10183..10572)
DNA (390bp) protein (130aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
Nudix family protein, MutT subfamily bin=GWC2_Methylomirabilis_70_16 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
B_1_S1_Biohub_coassembly_k141_2947697_10
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10569..10964)
DNA (396bp) protein (132aa)
Thioesterase superfamily protein Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQ25_KYRT2
thioesterase superfamily protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
B_1_S1_Biohub_coassembly_k141_2947697_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(11057..11743)
DNA (687bp) protein (229aa)
Pyrimidine reductase, riboflavin biosynthesis Tax=Oscillatoria acuminata PCC 6304 RepID=K9TPH3_9CYAN
pyrimidine reductase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
B_1_S1_Biohub_coassembly_k141_2947697_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11831..12127
DNA (297bp) protein (99aa)
Flagellar basal body rod protein Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W154_RHILT
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAM09966.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
flagellar hook-basal body protein
B_1_S1_Biohub_coassembly_k141_2947697_13
RLO_PLX_64_10, Bacteria

Not on your lists

12411..13625
DNA (1215bp) protein (405aa)
putative coenzyme PQQ synthesis protein bin=bin1_lowGC species=Geobacillus sp. GHH01 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
B_1_S1_Biohub_coassembly_k141_2947697_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13821..15110
DNA (1290bp) protein (430aa)
Peptidase, U32 superfamily bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
peptidase U32
Tax=GWA2_Deltaproteobacteria_65_63_curated
B_1_S1_Biohub_coassembly_k141_2947697_15
unknown

Not on your lists

comp(15159..16430)
DNA (1272bp) protein (424aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2947697_16
unknown

Not on your lists

comp(16524..17246)
DNA (723bp) protein (241aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2947697_17
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17277..18011)
DNA (735bp) protein (245aa)
Pimelyl-[acyl-carrier protein] methyl ester esterase Tax=sulfur-oxidizing symbionts RepID=G2D996_9GAMM
bioH protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
B_1_S1_Biohub_coassembly_k141_2947697_18
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(18008..18439)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KT18_SOLCM
hypothetical protein
Tax=RBG_16_Chloroflexi_51_16_curated
B_1_S1_Biohub_coassembly_k141_2947697_19
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18436..19287)
DNA (852bp) protein (284aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase Tax=Plesiocystis pacifica SIR-1 RepID=A6GDW1_9DELT
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EDM75910.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
B_1_S1_Biohub_coassembly_k141_2947697_20
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(19280..20980)
DNA (1701bp) protein (567aa)
carbon starvation protein CstA Tax=Schlesneria paludicola RepID=UPI00029B39D5
carbon starvation protein CstA
Tax=RBG_16_Zixibacteria_43_9_curated
B_1_S1_Biohub_coassembly_k141_2947697_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20977..21729)
DNA (753bp) protein (251aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AEN73169.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AEN73169.1};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Enoyl-CoA hydratase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKB6_RHOMR
B_1_S1_Biohub_coassembly_k141_2947697_22
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21931..22953)
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase Tax=uncultured candidate division OP1 bacterium RepID=H5SLQ8_9BACT
alcohol dehydrogenase zinc-binding domain-containing protein
Tax=GWA2_Ignavibacteria_54_16_curated
B_1_S1_Biohub_coassembly_k141_2947697_23
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(22960..23769)
DNA (810bp) protein (270aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_2947697_24
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(23955..25412)
DNA (1458bp) protein (486aa)
Aldehyde Dehydrogenase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
NAD-dependent aldehyde dehydrogenase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
Displaying 24 items

View Taxonomy